PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIUR3_25303-P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 80aa MW: 9266.88 Da PI: 7.182 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 51.4 | 3.5e-16 | 19 | 66 | 1 | 48 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLp 48 lppGfrF+Ptdeelvv+yL++k+ + +l++ vi++v ++y+++Pwd+p TRIUR3_25303-P1 19 LPPGFRFRPTDEELVVQYLRRKALALPLPA-AVIPDVqNLYSLDPWDIP 66 79****************************.89999999*********9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.27E-18 | 16 | 71 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 19.831 | 19 | 80 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.4E-8 | 20 | 63 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 80 aa Download sequence Send to blast |
MERTPVMVRQ GGQEVLRQLP PGFRFRPTDE ELVVQYLRRK ALALPLPAAV IPDVQNLYSL 60 DPWDIPGFHC LYPCLRFCLD |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator of the mannan synthase CSLA9. Recognizes and binds to DNA-specific sequence of CSLA9 promoter. {ECO:0000269|PubMed:24243147}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020151744.1 | 6e-39 | NAC domain-containing protein 83-like | ||||
Swissprot | O22798 | 2e-18 | NAC41_ARATH; NAC domain-containing protein 41 | ||||
TrEMBL | M8A8L0 | 3e-51 | M8A8L0_TRIUA; NAC domain-containing protein 29 | ||||
STRING | TRIUR3_25303-P1 | 5e-52 | (Triticum urartu) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP11818 | 31 | 40 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G65910.1 | 2e-12 | NAC domain containing protein 28 |
Publications ? help Back to Top | |||
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