PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIUR3_25137-P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 251aa MW: 28011.9 Da PI: 6.1734 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 47.8 | 4.8e-15 | 15 | 64 | 2 | 52 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvk 52 p+GfrFhPtd e+++ yL +kv +k ++ ++ evd++k+ePw+Lp+k+k TRIUR3_25137-P1 15 PQGFRFHPTDVEIITSYLVPKVLNKAFDP-IAVGEVDLNKCEPWELPEKAK 64 89************************999.78***************5433 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 4.05E-16 | 5 | 65 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 10.666 | 14 | 174 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.2E-6 | 15 | 57 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence Send to blast |
MADHLQVQRQ QLKFPQGFRF HPTDVEIITS YLVPKVLNKA FDPIAVGEVD LNKCEPWELP 60 EKAKMGIFHK STGLKKVVMS SYAIPMPMSM GAEEQHGFLE SGTLPPFMGY GASSSLVPPS 120 SLPAYSSYQM HDTGARLSMM GTAVLLMMND HYFGNHHYQN MATPPRPLVS FYHHDHHQQQ 180 QQQQQQHMIQ MPMEMQIGAD EGLMIGVEPG SGPSSIVSQE DTLARLRSND VATTADEISS 240 VNMGTDGMWK Y |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020167840.1 | 1e-94 | protein CUP-SHAPED COTYLEDON 2-like | ||||
TrEMBL | M7Z573 | 0.0 | M7Z573_TRIUA; NAC domain-containing protein 77 | ||||
STRING | TRIUR3_25137-P1 | 0.0 | (Triticum urartu) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18270.2 | 4e-21 | Arabidopsis NAC domain containing protein 87 |