PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_23792-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family CAMTA
Protein Properties Length: 1475aa    MW: 163237 Da    PI: 7.0947
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_23792-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1178.21e-55211363117
             CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 
                      +e ++rwl+++ei++iL n++k++++ e+++rp+sgsl+L++rk++ryfrkDG+ w+kkkdgktv+E+hekLKvg+v+vl+cyYah+een++fq
  TRIUR3_23792-P1  21 QEaQNRWLRPTEICQILSNYKKFSIAPEPPNRPPSGSLFLFDRKILRYFRKDGHIWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQ 114
                      5559****************************************************************************************** PP

             CG-1  96 rrcywlLeeelekivlvhylev 117
                      rr+ywlLee + +ivlvhyle 
  TRIUR3_23792-P1 115 RRTYWLLEEGFMNIVLVHYLEI 136
                      *******************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143781.10316142IPR005559CG-1 DNA-binding domain
SMARTSM010763.2E-7719137IPR005559CG-1 DNA-binding domain
PfamPF038593.5E-5022135IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.102.5E-7444531IPR013783Immunoglobulin-like fold
PfamPF018334.4E-7445518IPR002909IPT domain
SuperFamilySSF812968.56E-18445530IPR014756Immunoglobulin E-set
SuperFamilySSF484032.8E-16622737IPR020683Ankyrin repeat-containing domain
CDDcd002042.72E-12623735No hitNo description
Gene3DG3DSA:1.25.40.201.3E-16632738IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029717.396643737IPR020683Ankyrin repeat-containing domain
PROSITE profilePS500889.458676708IPR002110Ankyrin repeat
SMARTSM002480.069676705IPR002110Ankyrin repeat
SMARTSM00248420715744IPR002110Ankyrin repeat
SuperFamilySSF525405.58E-8847900IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000151.5849871IPR000048IQ motif, EF-hand binding site
PfamPF006120.0083851870IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.627851879IPR000048IQ motif, EF-hand binding site
SMARTSM000150.0022872894IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.651873897IPR000048IQ motif, EF-hand binding site
PfamPF006129.8E-5874894IPR000048IQ motif, EF-hand binding site
SuperFamilySSF501042.32E-510791115IPR008991Translation protein SH3-like domain
Gene3DG3DSA:2.30.30.301.0E-510791113IPR014722Ribosomal protein L2 domain 2
Gene3DG3DSA:3.20.20.1009.2E-714171474IPR023210NADP-dependent oxidoreductase domain
SuperFamilySSF514305.11E-614241474IPR023210NADP-dependent oxidoreductase domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009409Biological Processresponse to cold
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071275Biological Processcellular response to aluminum ion
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 1475 aa     Download sequence    Send to blast
MAEMHKYGLS NQPPDIPQIL QEAQNRWLRP TEICQILSNY KKFSIAPEPP NRPPSGSLFL  60
FDRKILRYFR KDGHIWRKKK DGKTVKEAHE KLKVGSVDVL HCYYAHGEEN ENFQRRTYWL  120
LEEGFMNIVL VHYLEIKGGK QSFSRSKEAE DSPACSNSFA SQSQVASQTM DAESPYSGQI  180
SEYEDAETGY QDENQASTAN ISNNFVTHHG IASVFNDVGA GLRSGSKTAL DSVHFGEPFP  240
EYPTGFTEPT LYSSVTTMGS NNLDDNSRLE TLMTEALYTN NLTQKETDAL SAAGMTSSQR  300
RPPEAPVHSG RLKRADNVKR GLKDWNITKE LAMDRGAWKS TCQNHELVHN DSYTDGSMGY  360
PLLKQSSLDL FKIEPNGLKK FDSFSKWMSD ELAADLDIKS TSDAFWSSTE TVNVADGSSM  420
SIPMNEQLDA YVVSPSLSQD QLFSIIDVSP SWAYTGSQNK VLITGTFLTN KEHVENCKWS  480
CMFGDVEVPV EVLADGSLRC YTPVHQSGRV PFYVTCSNRV ACSEVREFEF HDSETQHMEA  540
ADPHITGINE MHLHIRLEKL LSLGPDDYEK YVMSGGNEKS ELISTIGSLM LDDKFTNLSA  600
PSDEEFSAAQ DKNLEKSVKD KLYYWLIHKI HDDGKGPNVL GKEGQGVIHL VAALGYDWAI  660
RPIIAAGVHV NFRDVRGWTA LHWAASCGRE RTVGALITNG AAAGALTDPT PHFLSGRTPA  720
DLASDNGHKG IAGFLAESAL TSHLSALTLK EAKGCNVEEI CGSIEADGFA EPSSAQLSRQ  780
DSQAESLKDS LSAVRKSTLA ASKIFQAFRV ESFHRKKVVE YGDDDCGLSD ERTLSLVSLK  840
NTKSGQNDMP HSAAVRIQNK FRGWKGRKEF MIIRQKIIKI QAHIRGHQVR RNYKKVVWSV  900
GIVEKVILRW RRKGRGLRGF QPDKQLEGPS SQIQPAEGGS AEGEDEYDFL KDGRKQAEGR  960
LQRSLARVKS MTQYPEAREQ YSRLQACVTE LQESKTLSSS PRSLTCSFDS EQQDEDDDTP  1020
HMVELDGRRC LCRCGLAGVL HVVYDGDLLA RAFSVAFSLV VLVVDHGCLV FVLVQPFKRF  1080
VLIGWVALVN YGKDYGRLVV IVDVVDQNRF RISSLRVPPL AVDLSCSSRI ALLYTYTTVS  1140
WYIPKNVEDT VHREVEIMQH LSGHPAVVTL KAVCGGCKSK LPLCAHVVLA LVCVVEWCLK  1200
GTRRLGVRDY ISLLSLIFCP KYKCINLIMG FSVMAAKRQH GVEMQVVSTL KALRSVRALG  1260
SMQNIGDVAV VLARLIRSNL GPAPAMYGAL DAVLSLCNCN SMTLLRLFCG VRGDTSDQAA  1320
AAYSLGDLHK GAAKISNDIL DSVGVSVYAT TKNSTTVYAK NGAICVCCNL LILTRVECPT  1380
FPKMAPETCP QPEAAKLPYK KLGDSDLLIS EITLGTLQFN QMEAKRPMCG SMESFQELIG  1440
KGKVQYIGVS NETTYGVMQF VHAAKLDGLP KIMSI
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00043PBMTransfer from AT5G64220Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020196708.10.0calmodulin-binding transcription activator 2-like isoform X1
TrEMBLM7ZWK40.0M7ZWK4_TRIUA; Calmodulin-binding transcription activator 2
STRINGTRIUR3_23792-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP60838140
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64220.20.0Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains