PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_22798-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 133aa    MW: 14880.1 Da    PI: 6.9735
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_22798-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.73.3e-191465155
              AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                     ++y+GVr+++ +g+++AeIrd s    +  r +lg+f+taeeAa+a+++ + +++g
  TRIUR3_22798-P1 14 TKYRGVRRRP-WGKFAAEIRDSSR---HgVRMWLGTFDTAEEAAAAYDRSAYSMRG 65
                     69********.**********432...25*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008475.3E-131465IPR001471AP2/ERF domain
CDDcd000181.54E-271474No hitNo description
PROSITE profilePS5103223.6171573IPR001471AP2/ERF domain
SuperFamilySSF541713.86E-231574IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.2E-301574IPR001471AP2/ERF domain
SMARTSM003804.0E-321581IPR001471AP2/ERF domain
PRINTSPR003673.4E-111627IPR001471AP2/ERF domain
PRINTSPR003673.4E-113955IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009789Biological Processpositive regulation of abscisic acid-activated signaling pathway
GO:0010186Biological Processpositive regulation of cellular defense response
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0090332Biological Processstomatal closure
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    Send to blast
MEGGEGSGGG GEPTKYRGVR RRPWGKFAAE IRDSSRHGVR MWLGTFDTAE EAAAAYDRSA  60
YSMRGRNAVL NFPDRAHVYE AEARRQGQGS SSSARQQNQQ QQQQQGQSGV IEFEYLDDDV  120
LQSMLHDHDK SNK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A8e-3561335127Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00029PBMTransfer from AT5G43410Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0090600.0BT009060.1 Triticum aestivum clone wdr1f.pk003.l5:fis, full insert mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020199104.11e-73ethylene-responsive transcription factor 14-like
SwissprotQ9LSX01e-34ERF96_ARATH; Ethylene-responsive transcription factor ERF096
TrEMBLT1MXP67e-93T1MXP6_TRIUA; Uncharacterized protein
STRINGTRIUR3_22798-P11e-93(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP10337465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43410.12e-29ERF family protein
Publications ? help Back to Top
  1. Zander M,Thurow C,Gatz C
    TGA Transcription Factors Activate the Salicylic Acid-Suppressible Branch of the Ethylene-Induced Defense Program by Regulating ORA59 Expression.
    Plant Physiol., 2014. 165(4): p. 1671-1683
    [PMID:24989234]