PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIUR3_22677-P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 181aa MW: 20331.1 Da PI: 8.6458 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 30.1 | 1.3e-09 | 7 | 100 | 2 | 94 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLp.k..kvkaeekew.yfFskrdkkyatgkrknratksgyWkatgkdk 90 ++G+ F+Pt el+++yL +++ + +i+e d++++ P++Lp + +++ + w +fF+ + + + + ++ + g W + g++k TRIUR3_22677-P1 7 TAGYVFQPTGLELIDHYLVPRAGLGGDIFPGFIDEGvDVLSLPPRELPfRenHIRDYGEVWgFFFAAK-LAGE--TCPTP-GAGGCWVQYGTEK 96 68*******************9888855556777655**********953445555666885555554.3322..23333.4579999999999 PP NAM 91 evls 94 + TRIUR3_22677-P1 97 PFAY 100 8877 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.11E-14 | 3 | 128 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 12.593 | 6 | 151 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.8E-9 | 8 | 122 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 181 aa Download sequence Send to blast |
MANPNLTAGY VFQPTGLELI DHYLVPRAGL GGDIFPGFID EGVDVLSLPP RELPFRENHI 60 RDYGEVWGFF FAAKLAGETC PTPGAGGCWV QYGTEKPFAY RYTWKGGAVW SPARWLMKEY 120 RLNRDAAAFR RAHPDPEARD VVFVVHKVYR KPVLPPPADS SSSDSKEEGS ERSMVLKRKR 180 S |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK372648 | 2e-83 | AK372648.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3008D18. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020158486.1 | 1e-110 | NAC transcription factor NAM-B2-like | ||||
TrEMBL | M7YZX6 | 1e-131 | M7YZX6_TRIUA; Uncharacterized protein | ||||
STRING | TRIUR3_22677-P1 | 1e-131 | (Triticum urartu) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP12891 | 22 | 31 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G63790.1 | 7e-06 | NAC domain containing protein 102 |