PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIUR3_22676-P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 191aa MW: 21312.2 Da PI: 8.2884 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 40.8 | 6.8e-13 | 6 | 138 | 4 | 128 |
NAM 4 GfrFhPtdeelvveyLkkkvegkkleleevike.vdiykvePwdLp..kkvkaeek.ew.yfFskrdkkyatgkrknratksgyWkatgkdkev 92 G+ F+Pt elv +yL ++ve + l vi+e vd++++ P L ++++ + + w fF+ + + + g W++ g++k+ TRIUR3_22676-P1 6 GYVFQPTGCELVGYYLMPRVELGGFFLPGVIAEgVDVLSLRPCALSfpENHRRDYSeLWgLFFAAKPAGE----TCPTPGAGGCWEQYGQEKAY 95 999*********************88888865516**********7323433333325567887765543....33333458************ PP NAM 93 lskkgel.....vglkktLvfy..kgrapkgektdWvmheyrl 128 ++ +g+ +++ +++ + + ++t+W m+eyrl TRIUR3_22676-P1 96 YDGEGSReavalLLTRRRFAYRysWRDGEVISQTRWRMKEYRL 138 *9733334556677888888853323445567*********98 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 18.732 | 3 | 167 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.7E-14 | 5 | 166 | IPR003441 | NAC domain |
Pfam | PF02365 | 8.1E-11 | 6 | 138 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 191 aa Download sequence Send to blast |
NLAAGGYVFQ PTGCELVGYY LMPRVELGGF FLPGVIAEGV DVLSLRPCAL SFPENHRRDY 60 SELWGLFFAA KPAGETCPTP GAGGCWEQYG QEKAYYDGEG SREAVALLLT RRRFAYRYSW 120 RDGEVISQTR WRMKEYRLNR NAAAFRRAHP GPVPPDVVFV VHKVYRKSLI PPPLPPDSNS 180 SEDGSSGSYI V |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_020158484.1 | 1e-95 | uncharacterized protein LOC109743803 | ||||
TrEMBL | T1MXD0 | 1e-138 | T1MXD0_TRIUA; Uncharacterized protein | ||||
STRING | TRIUR3_22676-P1 | 1e-138 | (Triticum urartu) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP12891 | 22 | 31 |