PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_21912-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Nin-like
Protein Properties Length: 338aa    MW: 38487.1 Da    PI: 8.5707
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_21912-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK811.2e-25197246352
           RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                      ++i+l d++ yF+lpi++A++ L++++++LK++CRqyGI+RWPhRkiksl
  TRIUR3_21912-P1 197 ASITLADIAPYFHLPIREASRALKIGVSILKQKCRQYGIPRWPHRKIKSL 246
                      78**********************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151920.134181266IPR003035RWP-RK domain
PfamPF020428.7E-21198246IPR003035RWP-RK domain
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    Send to blast
MVTILEHLEV GGVGKGRVHT MAIDCNRKGH ERARGRCSGI DTPTARLWLC ACLLRKCGRH  60
HAEVRHTLLE IEASCHQVVD LGGPTLDEIR VGTLIGAHLV EGCVELLEVL LGRGFNGFDL  120
VVDLAKTASL YKKFQQAPEL VKRDSDEKST RLEAEDKTSD VEVKEESGSD SDEDPQSGEE  180
LPAHVERRRR AKKQHIASIT LADIAPYFHL PIREASRALK IGVSILKQKC RQYGIPRWPH  240
RKIKSLDSLI SDLEFVMDDT DGDVVQKETR RQREKEREKE KEKEKQEAIQ ALAKRKRLLE  300
SEKEIIQQKP ALDLMAETKL FREDVFKRRY RAKRLPGQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3723870.0AK372387.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv3001B21.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020158590.11e-120protein RKD5-like
TrEMBLM7Y7R10.0M7Y7R1_TRIUA; Uncharacterized protein
STRINGTRIUR3_21912-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP106733142
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35590.15e-32RWP-RK domain-containing protein