PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_19830-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 231aa    MW: 25868.8 Da    PI: 6.45
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_19830-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM35.13.8e-11128102129
              NAM 102 lkktLvfykgrapkgektdWvmheyrle 129
                      ++ktLvfykgrap+g+k dW+mheyrle
  TRIUR3_19830-P1   1 MRKTLVFYKGRAPNGQKLDWIMHEYRLE 28 
                      89************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100521.469148IPR003441NAC domain
SuperFamilySSF1019413.14E-15148IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    Send to blast
MRKTLVFYKG RAPNGQKLDW IMHEYRLETN ENGAPHDEGW VVCKVFKKRV ATVQRMAATD  60
SAFWFNNDHV AFMAPRVDSP RQAVHHLQNA AYHHGHHQTY HHPCKVELEY HQLLPQEPAS  120
FLQLPQLEMP GLPDLIGAVA ASLQPCNQTH DGQASRQLEI EPVYVTDASA GEWRDLDKFM  180
ASQLSHDGST PKESSSYANP ALAFQAEGKH EEALDYVSAS ASSGGDNGLW K
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJQ6934231e-106JQ693423.1 Brachypodium distachyon SWN2 (SWN2) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020167162.11e-151NAC domain-containing protein 7-like
RefseqXP_020167163.11e-151NAC domain-containing protein 7-like
RefseqXP_020167164.11e-151NAC domain-containing protein 7-like
RefseqXP_020167165.11e-151NAC domain-containing protein 7-like
RefseqXP_020167167.11e-151NAC domain-containing protein 7-like
TrEMBLM7ZBN51e-174M7ZBN5_TRIUA; NAC domain-containing protein 7
STRINGTRIUR3_19830-P11e-175(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP23703892
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12260.13e-44NAC 007