PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_19801-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-X1
Protein Properties Length: 935aa    MW: 101050 Da    PI: 7.9973
Description NF-X1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_19801-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-NF-X1223.6e-07253270118
         zf-NF-X1   1 CGkHkCqklCHeGpCppC 18 
                      CG H+C+ +CHeG+CppC
  TRIUR3_19801-P1 253 CGVHRCKVTCHEGECPPC 270
                      ****************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd060084.99E-552114No hitNo description
SMARTSM004380.0237694IPR000967Zinc finger, NF-X1-type
PfamPF014226.97893IPR000967Zinc finger, NF-X1-type
CDDcd060081.08E-10121169No hitNo description
SMARTSM004380.0024131150IPR000967Zinc finger, NF-X1-type
PfamPF014220.024131148IPR000967Zinc finger, NF-X1-type
CDDcd060081.83E-7185228No hitNo description
PfamPF014220.014189212IPR000967Zinc finger, NF-X1-type
SMARTSM004380.001195214IPR000967Zinc finger, NF-X1-type
CDDcd060087.69E-13243291No hitNo description
SMARTSM004381.3E-4253272IPR000967Zinc finger, NF-X1-type
PfamPF014224.9E-6253270IPR000967Zinc finger, NF-X1-type
CDDcd060082.81E-7338390No hitNo description
SMARTSM004380.0043348367IPR000967Zinc finger, NF-X1-type
PfamPF014220.044348366IPR000967Zinc finger, NF-X1-type
SMARTSM004380.49405423IPR000967Zinc finger, NF-X1-type
PfamPF01422110405421IPR000967Zinc finger, NF-X1-type
SMARTSM004380.027458493IPR000967Zinc finger, NF-X1-type
PfamPF014220.0076458474IPR000967Zinc finger, NF-X1-type
PfamPF014223.4495521IPR000967Zinc finger, NF-X1-type
SMARTSM004384.1502523IPR000967Zinc finger, NF-X1-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009642Biological Processresponse to light intensity
GO:0009651Biological Processresponse to salt stress
GO:0009697Biological Processsalicylic acid biosynthetic process
GO:0010188Biological Processresponse to microbial phytotoxin
GO:0010310Biological Processregulation of hydrogen peroxide metabolic process
GO:0042742Biological Processdefense response to bacterium
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 935 aa     Download sequence    Send to blast
MSGDFGSGGR AADEPVLEAA TADVRARDIA YTCFCRRRRD PPNDLFLTPH SCGEPCSKPL  60
GKADPAAKGD DVATRCPHVC VLQCHPGPCP PCKAFAPERP CPCGKQSITR RCADRSTPVT  120
CGQRCEKLLP CRRHRCEKVC HTGPCGDCEV NFPAQCFCGK KTETLLCGEM VLKGKLSDKD  180
GVFSCSEVCG HNLACRNHAC QDVCHPGPCG ECELLPGKVT TCHCGKTRLQ EKRASCLDPI  240
PTCDKVCDKR LPCGVHRCKV TCHEGECPPC LVRVEQRCRC GSSGQMVECY KVSMEEFRCN  300
KPCGRKKNCG RHRCSECCCP LSKPFAQHQG DNMDPHFCQI PCGKKLRCGQ HGCQHLCHSG  360
HCDPCRETIF HDLTCACGRT SIPPPQPCGT PTPSCPHQCM VPQPCGHPAS HQCHFGDCPP  420
CVVPVTRECV GGHVMLRNIP CGSKDIRCNQ PCGKNRQCGL HACARTCHPA PCDPPPANGE  480
ASSSSGGRVS CGQLCGVPRR ECKHTCNAPC HPSSPCPDVR CEHRVTITCS CGRITTAVPC  540
SAGGAYNGDS AFDISVMQQL PMPLQPVESN GKRVPLGQRK LCCDEECAKM ERKRVLAEAF  600
DITPPNLDAL HFGENSNASD LLSDLFRREP KWVLAIEERC KFLVLGKTKG NSSSNIKFHV  660
FCHMMKDKRD AIRLIADRWK LSVQAVGWEP KRFITVHVTP KSKVPARVLG SKPGVPVSAS  720
HPYFDPMVDM DPRLVVAMLD LPRDADVSSL VLRFGGECEL VWLNDKNAAA VFSDPARAAT  780
ALRRLDYGSA YQGAAMFCPS SITQASVPSN VWIGAQRDGG LAAKSSANPW KASQSEPDPS  840
GDWTVLSHAS GSVWKRGDTP AQVMGSSNRW NALESDAATS SGPTNKRKPP LRTETGSSSS  900
APRVGAGSSA APSAGQSVSK LQPDVEVEDW EESCE
Functional Description ? help Back to Top
Source Description
UniProtMediates E2-dependent ubiquitination (By similarity). Confers resistance to osmotic stress such as high salinity. Promotes H(2)O(2) production. Negative regulator of some defense-related genes via an salicylic acid (SA)-dependent signaling pathway. Confers susceptibility to the compatible phytopathogen Pseudomonas syringae pv. tomato strain DC3000 (Pst DC3000). Mediates resistance to type A trichothecenes (phytotoxins produced by phytopathogenic fungi). {ECO:0000250, ECO:0000269|PubMed:16905136, ECO:0000269|PubMed:18069941, ECO:0000269|PubMed:19704430}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By brassinosteroids, osmotic stress and high salinity. Accumulates in response to SA, ethylene, methyl jasmonate (MeJA), flagellin (e.g. flg22), and type A trichothecenes such as T-2 toxin and diacetoxyscirpenol (DAS), but not in response to type B trichothecenes such as deoxynivalenol (DON). {ECO:0000269|PubMed:16905136, ECO:0000269|PubMed:18069941, ECO:0000269|PubMed:19704430}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3605820.0AK360582.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1121G13.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020150167.10.0NF-X1-type zinc finger protein NFXL1-like
RefseqXP_020150168.10.0NF-X1-type zinc finger protein NFXL1-like
SwissprotQ9SY590.0NFXL1_ARATH; NF-X1-type zinc finger protein NFXL1
TrEMBLM8AS560.0M8AS56_TRIUA; NF-X1-type zinc finger protein NFXL1
STRINGTRIUR3_19801-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP61303543
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10170.10.0NF-X-like 1