PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_19145-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family G2-like
Protein Properties Length: 553aa    MW: 61334.7 Da    PI: 4.7038
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_19145-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like46.96.3e-15135184352
          G2-like   3 rlrWtpeLHerFveaveqLGGsekAtPktilelmkvkg..LtlehvkSHLQk 52 
                      r  W++eLHe+F++ave LG s   t ++i + m+ k+  Lt++h++SHLQk
  TRIUR3_19145-P1 135 RFIWSSELHEKFLQAVEVLGAS--GTARKIHQYMNAKDlnLTIQHIASHLQK 184
                      789****************655..5889********973369*********9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.605.2E-14134188IPR009057Homeodomain-like
SuperFamilySSF466891.97E-9134188IPR009057Homeodomain-like
TIGRFAMsTIGR015571.3E-12135184IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 553 aa     Download sequence    Send to blast
MAPRGSEPVL VLPFQTGEEA LDSLKRGVAK DEELDLIVAE VHPGNTEVGT LRLFHHILNE  60
LEVPLITMCA YDEAVSARMT LGTCFNVVKP LDTETVNFLR MRALQHMSIK NHRSETEDGE  120
QDALNVNVYS DNLGRFIWSS ELHEKFLQAV EVLGASGTAR KIHQYMNAKD LNLTIQHIAS  180
HLQKKHMYMD VFIFQKEHIN TGCGRRSYLT MKRFINIMPA SAYKVASAKP NNHPATTQTQ  240
FTHGVASAIW DKYPGMVWPH VEGSSASSAM WYNYPGKPWG QVGESSAGAR VSQTNARPPP  300
VLIHGTKSIW DRYEESLQYY NERMSYKRGV LPIRSKALDG YGRNISVNLE REISCTESAG  360
KIVINLESDD MQKDTTDDVH ATVTPQEDIM DEVHGAVTLQ KDTMNEVYAT VTLQKDTMDG  420
AHAAVTPHGV NEVPAANMGA GYLVDLAGNY HPAAENAQSE PFSDLDWEEV EKFWTNQMEG  480
QQEQQGLELV DLLQVDGISP EELLQEDEAW NQALQPANPA NVVNNAPMAE EPAAGGAPVY  540
DLANQSGVAE NVF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020157230.10.0uncharacterized protein LOC109742549 isoform X1
RefseqXP_020157231.10.0uncharacterized protein LOC109742549 isoform X1
RefseqXP_020157232.10.0uncharacterized protein LOC109742549 isoform X1
RefseqXP_020157233.10.0uncharacterized protein LOC109742549 isoform X1
RefseqXP_020157234.10.0uncharacterized protein LOC109742549 isoform X2
TrEMBLM7ZR510.0M7ZR51_TRIUA; Uncharacterized protein
STRINGTRIUR3_19145-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP130171928
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.14e-08response regulator 2