PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIUR3_18984-P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bZIP | ||||||||
Protein Properties | Length: 376aa MW: 41447.5 Da PI: 6.2321 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 37.1 | 6.9e-12 | 179 | 226 | 5 | 52 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 k+ +rk++NR +ArrsR RK a ++eLee v L N +L+ l TRIUR3_18984-P1 179 KANKRKESNRDSARRSRSRKAAHTKELEEQVSLLRVANNSLIRHLADV 226 899**************************************9777655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.9E-9 | 175 | 239 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.91 | 177 | 229 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 6.0E-10 | 177 | 252 | No hit | No description |
Pfam | PF00170 | 1.1E-9 | 179 | 225 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.27E-8 | 179 | 231 | No hit | No description |
Pfam | PF12498 | 4.3E-29 | 246 | 352 | IPR020983 | Basic leucine-zipper, C-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 376 aa Download sequence Send to blast |
MGVVKRDSTF LCPRDTKHWV DTKLEEINVG LGKYETLDES SHIVANPEAS TLYPNPTAEG 60 SRKRPYDVHE MVGAVEVIPT PPAASPEVDP VAYNAMLRRK LDAHLAAVAM LRNTQGICRQ 120 SSHDNGASQN PDSIQGSENH TEDVSVHQLS SSSLEPSPSD GDMEGEAQTT GTMHISAEKA 180 NKRKESNRDS ARRSRSRKAA HTKELEEQVS LLRVANNSLI RHLADVSQRY INISIDNRVL 240 KANVETLEAK VKMAEETMKR VTCTNNFPQA ISGTSLRIPF SGSPLDGICD NPLPTQNTSL 300 SYLPTTTTDF AVKNNYIPEP APAFQIHDQM SSLHMQPMSC LDHHPQMMHI GIPTSTPTPQ 360 RESTTLDSNE IVTMMM |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | Y09013 | 0.0 | Y09013.1 T.aestivum mRNA for transcriptional activator. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020187695.1 | 0.0 | basic leucine zipper 63-like isoform X1 | ||||
TrEMBL | M8A1I9 | 0.0 | M8A1I9_TRIUA; Regulatory protein opaque-2 | ||||
STRING | TRIUR3_18984-P1 | 0.0 | (Triticum urartu) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP25202 | 5 | 5 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28770.1 | 1e-25 | bZIP family protein |