PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIUR3_18835-P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 479aa MW: 52579.6 Da PI: 5.1452 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 79.1 | 9.7e-25 | 10 | 132 | 5 | 128 |
NAM 5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +r +Ptd + v++yL + ++g+++ +e++i++vdiy++eP+dL + + +a++ + +fF++r++k+ +++++ r++ g+W + ++v TRIUR3_18835-P1 10 YRLNPTDVDAVTYYLPRLIAGQPHGAEKFIHHVDIYSCEPKDLAAkiapvpQ-AASSGDRFFFTTRKSKNGSKTQSVRTAGGGTWTVNAT-TAV 101 699***********************999**************853555432.2234478*************************97654.677 PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ g +vg +k L f +kg++t Wvm+eyr TRIUR3_18835-P1 102 KH-AGVEVGERKNLSFR----KKGKSTGWVMEEYRC 132 77.8999*********8....78899********95 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 25.718 | 6 | 152 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.2E-14 | 9 | 131 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 3.14E-26 | 10 | 151 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 479 aa Download sequence Send to blast |
MEGLDVFQHY RLNPTDVDAV TYYLPRLIAG QPHGAEKFIH HVDIYSCEPK DLAAKIAPVP 60 QAASSGDRFF FTTRKSKNGS KTQSVRTAGG GTWTVNATTA VKHAGVEVGE RKNLSFRKKG 120 KSTGWVMEEY RCLLPEATVA DGVKVFCKIH LAQHPPDAAR QESAAYMLQE PQREPVTVST 180 HAQKRPATAA TADPHPSRPN KRMRGAVPVP APATPSFLMY DEAARAMYGP LARTNFPVQD 240 AVAVPVAIEG ASASCEFTTT SYHSDVASSS HDMQRQAQAP AISSQSDVLE SVKHYSQQQM 300 IVPEAGSSIA RSTSEEDVFE PLEPVSNLLD EEADGFDLEE LMRMMEDDPT EVEPVTGAST 360 GVEMGQQEPL YLDTLDQGRL EDMLQSDCPY PMWWRSEDGA MHNPASHDAD KEKRYNAASD 420 LDAPSLQGHD HLFKPRPCFF DPFEAALKAE EALEKEKRDN LHAGPLGGHN NFFSSASVH |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020183750.1 | 0.0 | protein NTM1-like 9 | ||||
TrEMBL | M7ZKW8 | 0.0 | M7ZKW8_TRIUA; Dehydration-responsive element-binding protein 2B | ||||
STRING | TRIUR3_18835-P1 | 0.0 | (Triticum urartu) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1832 | 27 | 99 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G17260.1 | 7e-17 | NAC domain containing protein 86 |