PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_18561-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 352aa    MW: 38406.1 Da    PI: 6.9484
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_18561-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM137.86.8e-43181403128
              NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 
                      pGfrFhPt+eel+ +y      gkk ++ ++i +++iy+++PwdLp ++k +e+ewyfF++rd+k+ +g r+nr+t++g+Wkatg+d+++ s+ 
  TRIUR3_18561-P1  18 PGFRFHPTEEELLGFYPP----GKKPPF-DIIGTLNIYRHDPWDLPGMAKIGEREWYFFVPRDRKAGSGGRPNRTTERGFWKATGSDRAIRSTg 106
                      9************99854....555566.88***************888999****************************************87 PP

              NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
                        ++++glkktLvfy+grap+g+ktdWvm+eyrl
  TRIUR3_18561-P1 107 dPKRVIGLKKTLVFYQGRAPRGTKTDWVMNEYRL 140
                      66778***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.59E-5412160IPR003441NAC domain
PROSITE profilePS5100549.4316160IPR003441NAC domain
PfamPF023654.1E-2218140IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    Send to blast
MAMAAVASST MEVDQDLPGF RFHPTEEELL GFYPPGKKPP FDIIGTLNIY RHDPWDLPGM  60
AKIGEREWYF FVPRDRKAGS GGRPNRTTER GFWKATGSDR AIRSTGDPKR VIGLKKTLVF  120
YQGRAPRGTK TDWVMNEYRL PDNGAPPPQE DTVLCKVYRK ATPLKELEQR AFQMEEMKQR  180
SGGNGGYGYS GATRACPVPA AGDFYLSQSD DVQDNFLIPS SSSSSSSSVA LSGNSSSHDA  240
PRVAKEEADV ATATVASTSS LSQAANAPFH LQLPAVNPPC GLQLPAANHG MSNMSSLQLP  300
AASQGVVDLP SLQLPAASSH GVFDWLNDPF LTQLRSPWQD QHCMSPYVHL LY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A2e-441816219167NO APICAL MERISTEM PROTEIN
1ut4_B2e-441816219167NO APICAL MERISTEM PROTEIN
1ut7_A2e-441816219167NO APICAL MERISTEM PROTEIN
1ut7_B2e-441816219167NO APICAL MERISTEM PROTEIN
3swm_A2e-441816222170NAC domain-containing protein 19
3swm_B2e-441816222170NAC domain-containing protein 19
3swm_C2e-441816222170NAC domain-containing protein 19
3swm_D2e-441816222170NAC domain-containing protein 19
3swp_A2e-441816222170NAC domain-containing protein 19
3swp_B2e-441816222170NAC domain-containing protein 19
3swp_C2e-441816222170NAC domain-containing protein 19
3swp_D2e-441816222170NAC domain-containing protein 19
4dul_A2e-441816219167NAC domain-containing protein 19
4dul_B2e-441816219167NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3673760.0AK367376.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv2055P15.
GenBankAK3679630.0AK367963.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv2065K10.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020190294.10.0NAC domain-containing protein 72-like
SwissprotQ10S651e-138NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBLM7ZKV90.0M7ZKV9_TRIUA; Putative NAC domain-containing protein 94
STRINGTRIUR3_18561-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP177038105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.12e-83NAC domain containing protein 36
Publications ? help Back to Top
  1. Hong Y,Zhang H,Huang L,Li D,Song F
    Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice.
    Front Plant Sci, 2016. 7: p. 4
    [PMID:26834774]