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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIUR3_18560-P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 369aa MW: 40587.9 Da PI: 7.6337 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 152.9 | 1.4e-47 | 18 | 144 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 pGfrFhPt+eel+ +yL + + gkkl++ ++i +++iy+++PwdLp ++k +e+ewyfF++rd+k+ +g r+nr+t++g+Wkatg+d+++ s+ TRIUR3_18560-P1 18 PGFRFHPTEEELLGFYLSRVALGKKLHF-DIIGTLNIYRHDPWDLPGMAKIGEREWYFFVPRDRKAGSGGRPNRTTERGFWKATGSDRAIRSTv 110 9*************************99.99***************888999***************************************998 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++++glkktLvfy grap+g+ktdWvm+eyrl TRIUR3_18560-P1 111 dSKRVIGLKKTLVFYLGRAPRGTKTDWVMNEYRL 144 88889***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 4.97E-58 | 11 | 164 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 54.849 | 16 | 164 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.1E-24 | 18 | 144 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 369 aa Download sequence Send to blast |
MAMAAVASPT MEVDQDLPGF RFHPTEEELL GFYLSRVALG KKLHFDIIGT LNIYRHDPWD 60 LPGMAKIGER EWYFFVPRDR KAGSGGRPNR TTERGFWKAT GSDRAIRSTV DSKRVIGLKK 120 TLVFYLGRAP RGTKTDWVMN EYRLPDTGAP PPQEDTVLCK VYRKATPLKE LEQRAFEMEE 180 MKQRSGSNGG YDYSGAARAC PVPAAGDFYL SPSDDVQDNF LIPSSSSSSS VALSGKSSSH 240 DAPRVAKKEA DVATVTVAST SSLSQTVNVP FHLQLPAVNP PCGLQLQEAN HGMSNMSSLE 300 LPAANHGLSN MSNLRVPAAN QGVLDLPSLQ LPAASSRGVF DWLNDPFLTQ LRSPWQDQHC 360 MSPYAHLLY |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 5e-48 | 18 | 166 | 19 | 167 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 5e-48 | 18 | 166 | 19 | 167 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 5e-48 | 18 | 166 | 19 | 167 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 5e-48 | 18 | 166 | 19 | 167 | NO APICAL MERISTEM PROTEIN |
3swm_A | 6e-48 | 18 | 166 | 22 | 170 | NAC domain-containing protein 19 |
3swm_B | 6e-48 | 18 | 166 | 22 | 170 | NAC domain-containing protein 19 |
3swm_C | 6e-48 | 18 | 166 | 22 | 170 | NAC domain-containing protein 19 |
3swm_D | 6e-48 | 18 | 166 | 22 | 170 | NAC domain-containing protein 19 |
3swp_A | 6e-48 | 18 | 166 | 22 | 170 | NAC domain-containing protein 19 |
3swp_B | 6e-48 | 18 | 166 | 22 | 170 | NAC domain-containing protein 19 |
3swp_C | 6e-48 | 18 | 166 | 22 | 170 | NAC domain-containing protein 19 |
3swp_D | 6e-48 | 18 | 166 | 22 | 170 | NAC domain-containing protein 19 |
4dul_A | 5e-48 | 18 | 166 | 19 | 167 | NAC domain-containing protein 19 |
4dul_B | 5e-48 | 18 | 166 | 19 | 167 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK367963 | 0.0 | AK367963.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv2065K10. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020190295.1 | 0.0 | NAC domain-containing protein 72-like | ||||
Swissprot | Q10S65 | 1e-140 | NAC22_ORYSJ; NAC domain-containing protein 22 | ||||
TrEMBL | M7ZM80 | 0.0 | M7ZM80_TRIUA; Putative NAC domain-containing protein 94 | ||||
STRING | TRIUR3_18560-P1 | 0.0 | (Triticum urartu) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1770 | 38 | 105 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17040.1 | 9e-84 | NAC domain containing protein 36 |
Publications ? help Back to Top | |||
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