PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIUR3_18522-P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 402aa MW: 44775 Da PI: 8.1609 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 26.7 | 1.3e-08 | 302 | 344 | 2 | 50 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaar 50 gy+GVr ++ +g + AeIr + r slg+f t eA +a++aa TRIUR3_18522-P1 302 GYRGVRVCP-SGMFYAEIRS------SgVRLSLGTFETVHEADRAYDAAV 344 7********.7*********......44********************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.40.30.10 | 1.9E-30 | 45 | 135 | IPR012336 | Thioredoxin-like fold |
PROSITE profile | PS50404 | 15.353 | 54 | 133 | IPR004045 | Glutathione S-transferase, N-terminal |
Pfam | PF13417 | 1.1E-17 | 63 | 132 | IPR004045 | Glutathione S-transferase, N-terminal |
SuperFamily | SSF52833 | 2.21E-18 | 63 | 134 | IPR012336 | Thioredoxin-like fold |
CDD | cd00570 | 1.54E-14 | 64 | 121 | No hit | No description |
PROSITE profile | PS50405 | 9.638 | 111 | 257 | IPR010987 | Glutathione S-transferase, C-terminal-like |
SuperFamily | SSF47616 | 3.14E-23 | 128 | 255 | IPR010987 | Glutathione S-transferase, C-terminal-like |
CDD | cd03201 | 2.13E-78 | 134 | 254 | No hit | No description |
Gene3D | G3DSA:1.20.1050.10 | 3.4E-34 | 137 | 256 | IPR010987 | Glutathione S-transferase, C-terminal-like |
Pfam | PF13410 | 1.1E-7 | 162 | 228 | No hit | No description |
SMART | SM00380 | 2.0E-7 | 302 | 363 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.05E-12 | 302 | 358 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 14.394 | 302 | 357 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.53E-15 | 303 | 359 | No hit | No description |
Gene3D | G3DSA:3.30.730.10 | 3.7E-14 | 303 | 358 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0010731 | Biological Process | protein glutathionylation | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005829 | Cellular Component | cytosol | ||||
GO:0005886 | Cellular Component | plasma membrane | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0005515 | Molecular Function | protein binding | ||||
GO:0016740 | Molecular Function | transferase activity | ||||
GO:0043295 | Molecular Function | glutathione binding | ||||
GO:0045174 | Molecular Function | glutathione dehydrogenase (ascorbate) activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 402 aa Download sequence Send to blast |
MGSWPQRELR AVPAATRASR EHASPQIDRA RPLRFPAAGA VNRTPRRRLC VKAAVGHPDT 60 LGDCPFSQRV LLTLEEKKVP YQMKLIDVSN KPDWFLKINP EGKVPVYNGG DGKWIADSDV 120 ITQVIEEKYP TPSLVTPAEY ASVGSKIFST FVTFLKSKDA SDGSEKALVD ELQALEEHLK 180 AHGPYINGAN ISAVDLSLAP KLYHLQVALE HFKGWKVPET LTSVHAYTEA LFSRESFVKT 240 KATKENLIAG WAPKVNPEWR SASEEVRCAP RCRHRALLVD AFSSVADSSA VDMPLRARSS 300 FGYRGVRVCP SGMFYAEIRS SGVRLSLGTF ETVHEADRAY DAAVWRLFRT SLHMNFDDAR 360 TCQQAQDLVP PLRLVTDKDG HEHCRRQCCL LITEADELAM AE |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5d9t_A | 1e-137 | 48 | 256 | 21 | 229 | Dehydroascorbate reductase |
5d9v_A | 1e-137 | 48 | 256 | 21 | 229 | Dehydroascorbate reductase |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Involved in ascorbate homeostasis. Maintains redox pools of ascorbate by recycling dihydroascorbate (DHA) to ascorbate (Probable). Involved in scavenging reactive oxygen species (ROS) under oxidative stresses. Possesses dehydroascorbate reductase (DHAR) activity in vitro (PubMed:19011360). May function via a ping-pong reaction mechanism with an electron transfer at the active site (PubMed:26775680). Possesses chaperone-like activity in vitro (PubMed:26775680). {ECO:0000269|PubMed:19011360, ECO:0000269|PubMed:26775680, ECO:0000305|PubMed:23519921}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by heat shock (PubMed:10648822). Down-regulated during senescence (PubMed:25546583). {ECO:0000269|PubMed:10648822, ECO:0000269|PubMed:25546583}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AY074784 | 0.0 | AY074784.1 Triticum aestivum dehydroascorbate reductase (DHAR) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020196644.1 | 1e-150 | glutathione S-transferase DHAR2-like | ||||
Swissprot | Q65XA0 | 1e-136 | DHAR1_ORYSJ; Probable glutathione S-transferase DHAR1, cytosolic | ||||
TrEMBL | M7ZKX9 | 0.0 | M7ZKX9_TRIUA; Glutathione S-transferase DHAR2 | ||||
STRING | TRIUR3_18522-P1 | 0.0 | (Triticum urartu) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47520.1 | 1e-09 | ERF family protein |