PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_17973-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 1367aa    MW: 152174 Da    PI: 6.8867
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_17973-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.46.5e-1776125255
              AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       y+GVr++  +g+WvAeIr+p   + r  r +lg+f ta eAa+a++ a+++++g
  TRIUR3_17973-P1  76 AYRGVRQRT-WGKWVAEIREP---N-RgNRLWLGSFPTAVEAARAYDDAARAMYG 125
                      59****999.**********8...2.359***********************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003806.7E-3576139IPR001471AP2/ERF domain
SuperFamilySSF541711.44E-1976133IPR016177DNA-binding domain
PfamPF008478.9E-1176125IPR001471AP2/ERF domain
PROSITE profilePS5103221.79976133IPR001471AP2/ERF domain
PRINTSPR003672.5E-87788IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.2E-2977134IPR001471AP2/ERF domain
CDDcd000184.04E-1877135No hitNo description
PRINTSPR003672.5E-899115IPR001471AP2/ERF domain
SuperFamilySSF525409.57E-10395539IPR027417P-loop containing nucleoside triphosphate hydrolase
Gene3DG3DSA:3.40.50.3005.7E-4395517IPR027417P-loop containing nucleoside triphosphate hydrolase
PfamPF001769.1E-6405535IPR000330SNF2-related, N-terminal domain
SuperFamilySSF525405.91E-18573811IPR027417P-loop containing nucleoside triphosphate hydrolase
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 1367 aa     Download sequence    Send to blast
METGGSKREG DCPGQERKKK VRRRSTGPDS VAETIKKWKE ENQKLQQENG SRKAPAKGSK  60
KGCMAGKGGP ENSNCAYRGV RQRTWGKWVA EIREPNRGNR LWLGSFPTAV EAARAYDDAA  120
RAMYGAKARV NFSEQSPDAN SGCTLAPPLL TSNGATAASH PSDGKDESES PPSLISNGPT  180
AALHRSDAKD ESESAGTVAR KVKKEVSNDL RSTHEEHKTL EVSQPKGKAL HKEANELGIA  240
LRVGIKLRHI RKSYFCRSYY ILNCCRKVQP HRLTDLCPQN RLAESSLAVE DRGQSIGHTR  300
RSGSSSLRSE PFPTIYSEQH KSMPGDGGPI SIQKEGPASR QLKVKQCPVQ KLQRLPDGCH  360
PDFDNDHLYC VNKLLESWSK SHGSVLVDDK EHILKTILFT MVVLADARQP FLIVTTTASL  420
SLWEVQFNKL APHINVVVHD GRKDMLKSIQ AQQFFENGNH ITSQVLLSHP EAILEDIEPI  480
ARIGWEAIIV DYYQHFALKY LEQLKQLCTG FRVLLVSSPI EDIPEYRNML AFLRSGQKDN  540
SGYVDTADAL EKSKIISAHH IAYERKADSS KFLEHWVPAY ISQVQLGVYC SILLSNSSVL  600
QSKKKANSVE ALRDILLSLS KCCNHPYLRE CLEDSPVNNP DMTETVDIGV HASDKLLLLD  660
KMLKEISNRR LRVIVLFQSG GAGANPMGDI LEGVVCHRFG PESYEHVKCG AVMSSKQAAI  720
DMFNDKTKGR FVLLIESRAC LPSIKLLSVD AVIIYSSDWN PSNDLKALQR INIELQLKYV  780
SIFRLYTPFT VEENNFVLAK QGRLIDSNIQ DVMHSSSHSL LSWGAQFLFT RFDELLQDRY  840
SSKHSERGTS FMDEVILEFV TKLPTYTEDS SKINSVYISK ANMSGEFYSR SITVIGEKEG  900
MSMLDGDPSV FWLNLLDGKS PCWSYISELR QSINRMLQNI EEPAQVAAEE TDEATNVSVT  960
QQRECHVSVT QQRECHVSVD VFPNMAVERR NDLVDDVFSF RENNILHKQQ AEISNLVTHS  1020
QNKQILRIGA TQICGSSMHM QQLRNLPAQQ SLATLPHPPA EAEPAGIPGM EATTCLQSMQ  1080
YQPTEAEWGG ILGALAAHGS QPEMQPSTSM QDVLFEKTDL SGMPLLGSMN ARQSVEPSWD  1140
LHAGEEPAGT LGMVTTDKLQ SEIQQSATVH DRPAEAEGTS TLGTRALQNL HPEMQSSTAM  1200
HHVPLEIAHS EGRSQTGFQP NTSPGPEQLS QLLFFEEELN QVLSASDQPQ EDMSKMYKHH  1260
INLLRKAHEQ KKSQLQIERY REIEKVNRKY YSLLQKEDPT LPHSQMGLVD SYKEASVNKS  1320
PAQDFLGEVA PSSAAQGRSE RPAMVLPPKS SPAQTTASPG APPYDHQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5o9g_W3e-31367809380843Chromo domain-containing protein 1
6ftx_W2e-31367838198679Chromatin-remodeling ATPase
6g0l_M3e-31367809380843Chromo domain-containing protein 1
6g0l_W3e-31367809380843Chromo domain-containing protein 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703060.0HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020182859.10.0uncharacterized protein LOC109768534
TrEMBLM7YLU10.0M7YLU1_TRIUA; Dehydration-responsive element-binding protein 2A
STRINGTRIUR3_17973-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP165236
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40350.12e-31ERF family protein