PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_17496-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 310aa    MW: 34373.7 Da    PI: 4.531
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_17496-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.78.9e-1673123155
              AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                      s+y+GVr ++ +g+W+AeIrdp+    + +r ++g+f ++e Aa+a++a r++ + 
  TRIUR3_17496-P1  73 SKYPGVRLRS-WGKWAAEIRDPV----SkTRKWIGTFTSEEAAAAAYEAERNRVRT 123
                      89*****998.**********64....44**********88999999998988775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.58E-1273104No hitNo description
SuperFamilySSF541712.09E-1473123IPR016177DNA-binding domain
PfamPF008471.4E-873116IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.0E-1874122IPR001471AP2/ERF domain
SMARTSM003801.7E-1274135IPR001471AP2/ERF domain
PROSITE profilePS5103216.64774133IPR001471AP2/ERF domain
PRINTSPR003671.9E-67586IPR001471AP2/ERF domain
PRINTSPR003671.9E-697113IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    Send to blast
MMVPCSRKVR ISCCDPDATD SSDEDDRHAK KEKRMTMEVL VPMKTSGPLK SRKTLVPCGS  60
KKSIGTEKKQ PTSKYPGVRL RSWGKWAAEI RDPVSKTRKW IGTFTSEEAA AAAYEAERNR  120
VRTEMLAIKS RSPPSEHEAV SSEATVSCVS SSVSFGDQKA QEVHKLASME IDPDTADESL  180
LHCSPEPPGK EIQVDAFVGR MNVDESLVHC SSTPSDEEIP VDAFCSQMNE LPPISDYVCT  240
TDKLSLDDIS RLADMFPVND FVDTTGEPPG DDYIGLADIS HLPMPMFELD AELNWEGFDF  300
ASMERELERL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020201436.10.0pathogenesis-related genes transcriptional activator PTI6-like
TrEMBLT1MIB90.0T1MIB9_TRIUA; Uncharacterized protein
STRINGTRIUR3_17496-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50203763
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72360.17e-12ERF family protein