PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_16915-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 695aa    MW: 79240.9 Da    PI: 7.9816
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_16915-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.38.9e-161031811498
                      T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
               B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                      + +++p +f++++ g+   +++++l++++g s+++ +   k++++ vl++GW+ Fvk  +L   D vvF+++g+s+f   v vf+
  TRIUR3_16915-P1 103 QEMIVPDEFLRRFRGE--IPREIRLQTRNGHSYTIGV--AKYPDKLVLQAGWETFVKTYDLHMDDCVVFRYKGNSQF--DVIVFD 181
                      46899********776..6779***************..**********************************9999..776666 PP
2B341.52.3e-133954701796
                      E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEE CS
               B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkv 96 
                      +++kk++++h g+ke+   + l ++ g++W+v++  + + +   + +GW++Fvk+n++++gD+++F+l +  +  ++ v++
  TRIUR3_16915-P1 395 TFSKKYVQTHVGDKERR--ICL-QRCGKRWDVQF--SSSVEVKRIVSGWRKFVKDNDVETGDICIFELLKIdEMCTMEVHI 470
                      67899999997776664..664.569********..5555556688*********************76443444466666 PP
3B3421.7e-13600690599
                      -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE CS
               B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvf 97 
                      + + +v+ +  l+++kk++++h g++ +s  +    ++g++ +v+l   ++++     +GW +F+k+ngL++gD++++++ ++ +e +++v+++
  TRIUR3_16915-P1 600 MQKTNVTGRFALSISKKYVRRHLGDEVRS--IW-LERDGERCQVTL--GRGPQNNRVVGGWVKFAKENGLRTGDVCLLERLRHcKECTMKVHIV 688
                      56677888999***********8887776..55.457*********..9999999999*********************999889999999999 PP

                      -S CS
               B3  98 rk 99 
                      r+
  TRIUR3_16915-P1 689 RR 690
                      87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019362.94E-1887182IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.101.1E-1789181IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086311.30790183IPR003340B3 DNA binding domain
SMARTSM010190.001293186IPR003340B3 DNA binding domain
PfamPF023626.8E-12104179IPR003340B3 DNA binding domain
CDDcd100179.08E-15105181No hitNo description
PROSITE profilePS5086311.984379474IPR003340B3 DNA binding domain
SMARTSM010190.048382474IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.1E-14392473IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.39E-12392472IPR015300DNA-binding pseudobarrel domain
CDDcd100171.05E-12395471No hitNo description
PfamPF023626.5E-11395471IPR003340B3 DNA binding domain
SuperFamilySSF1019366.47E-16591691IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.108.6E-16591689IPR015300DNA-binding pseudobarrel domain
CDDcd100179.98E-17594689No hitNo description
SMARTSM010194.7E-6596691IPR003340B3 DNA binding domain
PROSITE profilePS508639.347596691IPR003340B3 DNA binding domain
PfamPF023622.4E-11598690IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 695 aa     Download sequence    Send to blast
MMVGLGARVV PISPTADKMC YVLQIMYADS NNVAEYEALL HGLRMDRRAS RGSRRPGSQA  60
RPSPRSSEKM GCERCERRDE LDYCNLDDRE KHFLMFIVDD CGQEMIVPDE FLRRFRGEIP  120
REIRLQTRNG HSYTIGVAKY PDKLVLQAGW ETFVKTYDLH MDDCVVFRYK GNSQFDVIVF  180
DRFGREKAFS VIRDSAPPVQ ESHNSGTENL DRSHGHSQPM EVQSPIENAN HPEGRPQPMR  240
MQPPTENANP SHAHPQPMRM QPPTENLDDP VGFSPPTENV NNLFGHSQPT QMQPSTEAVH  300
HFAQMQPSSE VVDHSNGHAQ TMQMQLFCRP TKLRQTMLQW DYSSMGNETA PSPSDTPRDS  360
LSSEHDIEGC ASPRYTLIYN TSLNTVQKEE VDEQTFSKKY VQTHVGDKER RICLQRCGKR  420
WDVQFSSSVE VKRIVSGWRK FVKDNDVETG DICIFELLKI DEMCTMEVHI IHAKDFDRPS  480
QIGGRSVDGW CKEATTKTVE PSHSRPQLVK MQLRNASVED SYSRPQPMEM QSPSKERKIR  540
VETVNSSLGN EGDSSMSEDS VTLTGCIGVH LRRIPLIQKK VVKQKVDLIG SEIPICVLVM  600
QKTNVTGRFA LSISKKYVRR HLGDEVRSIW LERDGERCQV TLGRGPQNNR VVGGWVKFAK  660
ENGLRTGDVC LLERLRHCKE CTMKVHIVRR VKRAG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020174612.10.0putative B3 domain-containing protein Os08g0325100
TrEMBLT1MGQ80.0T1MGQ8_TRIUA; Uncharacterized protein
STRINGTRIUR3_16915-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP124821536
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-13B3 family protein