PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_16902-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 348aa    MW: 38480.9 Da    PI: 9.3456
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_16902-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM123.81.5e-384715227128
              NAM  27 kleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk...kgelvglkktLvfykgrapk 115
                      ++++  vi+evdiyk++Pw+Lp +  ++++++ewyfFs+rd+ky++g r+nra+ sgyWkatg+dk++++    +ge+vg+kk Lvfy+gr pk
  TRIUR3_16902-P1  47 PCPA-AVIAEVDIYKLDPWELPsRaVFEGDNDEWYFFSPRDRKYPNGVRPNRAAGSGYWKATGTDKPITAGgvpGGEVVGVKKALVFYQGRPPK 139
                      4555.68***************6335556667*************************************988889999**************** PP

              NAM 116 gektdWvmheyrl 128
                      g kt+W+mheyrl
  TRIUR3_16902-P1 140 GLKTNWIMHEYRL 152
                      ***********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100546.42312189IPR003441NAC domain
SuperFamilySSF1019416.41E-4845189IPR003441NAC domain
PfamPF023651.5E-1563152IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009825Biological Processmultidimensional cell growth
GO:0009835Biological Processfruit ripening
GO:0009908Biological Processflower development
GO:0010150Biological Processleaf senescence
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    Send to blast
MEIFKQFSIN QLAVGGFFHS RSHVAQKRKK RFQQIKDTSQ VRAAAAPCPA AVIAEVDIYK  60
LDPWELPSRA VFEGDNDEWY FFSPRDRKYP NGVRPNRAAG SGYWKATGTD KPITAGGVPG  120
GEVVGVKKAL VFYQGRPPKG LKTNWIMHEY RLADAHAAAA AHTYRPPTRF KASSSMRLDD  180
WVLCRIYKKP NPQQLSPFYE PSPSPSPSSM DASLGLGHHH HHQYHHQQQQ QQEDTSSSSR  240
MLPRNPSVSD YLVDYSAVSE LFDSMPPPPQ PETASSVGHF FLGTTAGASD GEASTARKRQ  300
AAADSNNDGE MSSLHASKRW LGSDGSMTMM NGGFSIFGPD QPSQQDRI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-534219136170Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHM0371820.0HM037182.1 Triticum aestivum NAC transcription factor (NAC025) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020183872.11e-178NAC domain-containing protein 18-like
TrEMBLM7Z7E90.0M7Z7E9_TRIUA; NAC domain-containing protein 29
STRINGTRIUR3_16902-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP123736123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.15e-54NAC domain containing protein 25