PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_16508-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 336aa    MW: 36014.1 Da    PI: 7.0629
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_16508-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.55.2e-16147197255
              AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      g  GVr ++ +g+++AeIrd    + k +r++lg+f t+e Aa a+++a+ + +g
  TRIUR3_16508-P1 147 GLIGVRKRP-WGKFAAEIRDsT--R-KGARVWLGTFNTPEAAAMAYDQAAFSVRG 197
                      567******.**********32..2.24**********************99887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541715.82E-20147206IPR016177DNA-binding domain
PROSITE profilePS5103221.14147205IPR001471AP2/ERF domain
PRINTSPR003672.5E-7148159IPR001471AP2/ERF domain
PfamPF008478.2E-12149197IPR001471AP2/ERF domain
CDDcd000183.75E-15150207No hitNo description
SMARTSM003801.6E-28150211IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.3E-26150205IPR001471AP2/ERF domain
PRINTSPR003672.5E-7171187IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    Send to blast
MEQQFIHFGA TTSSTSSFYS TPTPTSTPPP PEQAQAAATL ASSTPDYHTS SSPMSSAFDM  60
GDTDDMHLLN TLLLHMSGSG TAASSHHYAF DLHMDVDVEP SSSSTSSSSS SYSSSDHHHQ  120
QQQQGMPATT TAKRRAPQQL HPAATKGLIG VRKRPWGKFA AEIRDSTRKG ARVWLGTFNT  180
PEAAAMAYDQ AAFSVRGAAA VLNYPVDRVQ ESLRTLALRP DVPGGSPVLA LKRRHSIRKR  240
SPNKAKKTAT LLAPTKMMIN DSAAAPVQQQ SAAACAGVVE LEDLGADYLE ELLRVSDEPS  300
ASSTTMVMGA FDHHHHHHVD DQSALANTAP MLFPHC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-231502051772Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020181160.11e-132ethylene-responsive transcription factor ERF094-like
TrEMBLM7ZJD60.0M7ZJD6_TRIUA; Ethylene-responsive transcription factor 1B
STRINGTRIUR3_16508-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27737249
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.12e-44ethylene response factor 1