PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIUR3_16508-P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 336aa MW: 36014.1 Da PI: 7.0629 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50.5 | 5.2e-16 | 147 | 197 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 g GVr ++ +g+++AeIrd + k +r++lg+f t+e Aa a+++a+ + +g TRIUR3_16508-P1 147 GLIGVRKRP-WGKFAAEIRDsT--R-KGARVWLGTFNTPEAAAMAYDQAAFSVRG 197 567******.**********32..2.24**********************99887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF54171 | 5.82E-20 | 147 | 206 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 21.14 | 147 | 205 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.5E-7 | 148 | 159 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 8.2E-12 | 149 | 197 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 3.75E-15 | 150 | 207 | No hit | No description |
SMART | SM00380 | 1.6E-28 | 150 | 211 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.3E-26 | 150 | 205 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.5E-7 | 171 | 187 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 336 aa Download sequence Send to blast |
MEQQFIHFGA TTSSTSSFYS TPTPTSTPPP PEQAQAAATL ASSTPDYHTS SSPMSSAFDM 60 GDTDDMHLLN TLLLHMSGSG TAASSHHYAF DLHMDVDVEP SSSSTSSSSS SYSSSDHHHQ 120 QQQQGMPATT TAKRRAPQQL HPAATKGLIG VRKRPWGKFA AEIRDSTRKG ARVWLGTFNT 180 PEAAAMAYDQ AAFSVRGAAA VLNYPVDRVQ ESLRTLALRP DVPGGSPVLA LKRRHSIRKR 240 SPNKAKKTAT LLAPTKMMIN DSAAAPVQQQ SAAACAGVVE LEDLGADYLE ELLRVSDEPS 300 ASSTTMVMGA FDHHHHHHVD DQSALANTAP MLFPHC |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 4e-23 | 150 | 205 | 17 | 72 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020181160.1 | 1e-132 | ethylene-responsive transcription factor ERF094-like | ||||
TrEMBL | M7ZJD6 | 0.0 | M7ZJD6_TRIUA; Ethylene-responsive transcription factor 1B | ||||
STRING | TRIUR3_16508-P1 | 0.0 | (Triticum urartu) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP277 | 37 | 249 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 2e-44 | ethylene response factor 1 |