PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_15439-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 942aa    MW: 104981 Da    PI: 5.0887
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_15439-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.82.8e-09539587348
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 
                      +WT  E ++lvd+v+q+G+g W+ I r        Rt  ++k++w+++l
  TRIUR3_15439-P1 539 AWTLSEVLKLVDGVAQFGPGKWSEIRRLSFasySYRTSVDLKDKWRNLL 587
                      7**************************99999*99************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129415.283532591IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.2E-12533590IPR009057Homeodomain-like
SuperFamilySSF466895.87E-15534599IPR009057Homeodomain-like
SMARTSM007173.2E-9536589IPR001005SANT/Myb domain
CDDcd116601.37E-17538588No hitNo description
PfamPF002495.0E-6539587IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009651Biological Processresponse to salt stress
GO:0046686Biological Processresponse to cadmium ion
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 942 aa     Download sequence    Send to blast
MEVETLQDAE ETKNGGNDFE ENGSLDPVVY QLVRVYSDFL SCTVSLWLYL KVEGDGTLVP  60
PTEDEVLQIE QFLDDKVDLP SIDDVGNVED FFTNDCMLLK EPDFEEGYSE LETNGEIHTQ  120
QFDADLEVDR LKPSDDSLDI PSKCTVVHDH KPDTEQGDNN IVHQDNASTE TPKSTVLNDS  180
CSAEKEKTDA CSRSVNNSST GPSVSGVTSS VPDFSILRGE VSLDNLTIRE LQEAFRATFG  240
RETTVKDKLW LKRRITMGLT NSCDVQSSGC VVKDYKIVCK DAKHELPTIG GIPKAEVEAT  300
SLVRYQVLGP GNERDTPSCS YYRSEDQQRS SNRLKGVSTD NDESEGTLQD EQGAAKRLRK  360
PTKRYIEELS DTETLDSTGK LSSPGKRVAH GEVLLRQRVT PLQEVDSLSI TYPTRKDTFG  420
GFSVHVPYAS RMRRGRPRRN FISFLDDDPP VECPEVQMAV ETMLGKDGEH VNHASSAVEV  480
PLTKNAEKKG GHIETAEKKG GHIETADNKE IHSIEPEDIC RTDAKTKTKR GLKRKHHRAW  540
TLSEVLKLVD GVAQFGPGKW SEIRRLSFAS YSYRTSVDLK DKWRNLLRAS QTQLSPENDV  600
ITSPFSTYMD VQLFFQSAQL FPSCPVCSWI TDCSLSSLFN GAEQGVCPRK SNPSIIPIPP  660
AILLRVKELA ELQPQAGNLA AAIKFSGQSS KAAQGRDVDL TKMSRDSSER NVSGIDHIKH  720
YKNIISELLL GKEGTFSTGV AKQTEVVMAQ YNRKAGEDSL PLFMEEIRGL SKCAMERLKH  780
ALHKVFTILN DEVDEIFGYI FALSEFRSEK LPSNHGSGSY EDSIAPPSVK KQKTVTVSTI  840
DAYEESHGHI DSDIFAQLTR DIRLIEESGK TRQEAAKMFS DGLLRKLAEM EQGVYDLLDT  900
VASKCRSMTT PEKIELGRRV RKLPETALDH MVEKLQVSYI ST
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJF9519310.0JF951931.1 Triticum aestivum clone TaMYB48 MYB-related protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003570524.10.0uncharacterized protein LOC100846611 isoform X2
TrEMBLM7ZJN80.0M7ZJN8_TRIUA; Telomere repeat-binding protein 4
STRINGTRIUR3_15439-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP69663341
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72650.11e-70TRF-like 6