PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_14542-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 322aa    MW: 36074.1 Da    PI: 6.6731
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_14542-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1241.3e-38710333128
              NAM  33 vikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmhe 125
                      +i+ev+iyk++PwdLp k+  +e+ewyfFs+rd+ky++g r+nra+ sgyWkatg+dk++ls+  +e +g+kk Lvfy+g+ pkg+ktdW+mhe
  TRIUR3_14542-P1   7 IIAEVNIYKCNPWDLPGKALFGENEWYFFSPRDRKYPNGARPNRAAGSGYWKATGTDKAILSTpANESIGVKKALVFYRGKPPKGVKTDWIMHE 100
                      699*************8777899**************************************9988899************************** PP

              NAM 126 yrl 128
                      yrl
  TRIUR3_14542-P1 101 YRL 103
                      *98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100548.351131IPR003441NAC domain
SuperFamilySSF1019412.22E-482131IPR003441NAC domain
PfamPF023654.9E-1522103IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    Send to blast
MPSPVPIIAE VNIYKCNPWD LPGKALFGEN EWYFFSPRDR KYPNGARPNR AAGSGYWKAT  60
GTDKAILSTP ANESIGVKKA LVFYRGKPPK GVKTDWIMHE YRLTAADNRT TKRRGSSMRL  120
DDWVLCRIHK KCNNLHNFSS SDQEQEHEQE SSTTVEDSHN NHTVSSPKSE AFDGDGDDQL  180
QLQQFRPMAI AKSCSLTDLL NTVDYAALSH LLLDGAGAGA SSSDAGADYQ LPPENPLIYS  240
QPPWQQTLHY NNNNNGYVNI DTIDVPQIPE ARVDDYGMNG DRYNGMKRKR SSGSLYCSQL  300
QLPADQYSGM LIHPFLSQQL HM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A8e-59413443171Stress-induced transcription factor NAC1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds DNA motifs 5'-CGT[AG](5N)NACG[ACT][AC][AT][ACG][ACT]-3' and 5'-CACG[ACT][AC][AT][AGT][CT]-3' in target genes promoters. Promotes leaf senescence and reduces fruit yield and sugar content, probably by establishing abscisic acid (ABA) homeostasis. {ECO:0000269|PubMed:29760199}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Accumulates during age-dependent and dark-induced leaf senescence. {ECO:0000269|PubMed:29760199}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankDQ0228430.0DQ022843.1 Triticum aestivum NAC domain transcription factor (NAC69-3) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020166974.10.0NAC transcription factor 29-like
SwissprotK4BWV29e-69NAP1_SOLLC; NAC domain-containing protein 1
TrEMBLA0A446SXV20.0A0A446SXV2_TRITD; Uncharacterized protein
TrEMBLM7ZU280.0M7ZU28_TRIUA; NAC domain-containing protein 29
TrEMBLQ4U0D40.0Q4U0D4_WHEAT; NAC domain transcription factor
STRINGTRIUR3_14542-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38033775
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.18e-65NAC-like, activated by AP3/PI
Publications ? help Back to Top
  1. Tomato Genome Consortium
    The tomato genome sequence provides insights into fleshy fruit evolution.
    Nature, 2012. 485(7400): p. 635-41
    [PMID:22660326]
  2. Ma X, et al.
    The NAC Transcription Factor SlNAP2 Regulates Leaf Senescence and Fruit Yield in Tomato.
    Plant Physiol., 2018. 177(3): p. 1286-1302
    [PMID:29760199]