PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_14541-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 403aa    MW: 43575.7 Da    PI: 7.5795
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_14541-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM162.91.2e-50211491129
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                      lppGfrFhPtdee+++ yL +k  + ++   +++ evd++++eP+dLp k++ +ekewyfF+++d ky+tg+r+nratk+gyWkatgkd+e+++
  TRIUR3_14541-P1  21 LPPGFRFHPTDEEIITSYLLRKFLDPSFVS-RAVGEVDLNSCEPRDLPGKANMGEKEWYFFVHKDLKYPTGSRANRATKEGYWKATGKDREIFK 113
                      79*************************888.88***************99999****************************************9 PP

              NAM  95 k.kgelvglkktLvfykgrapkgektdWvmheyrle 129
                         +elvg+kktLvfy+grap+g k++Wvmhe+rle
  TRIUR3_14541-P1 114 PrARELVGMKKTLVFYRGRAPRGAKSEWVMHEFRLE 149
                      867788***************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.09E-5818172IPR003441NAC domain
PROSITE profilePS5100556.7421172IPR003441NAC domain
PfamPF023653.1E-2622148IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 403 aa     Download sequence    Send to blast
MVESVAATPS EEQGRGGGLS LPPGFRFHPT DEEIITSYLL RKFLDPSFVS RAVGEVDLNS  60
CEPRDLPGKA NMGEKEWYFF VHKDLKYPTG SRANRATKEG YWKATGKDRE IFKPRARELV  120
GMKKTLVFYR GRAPRGAKSE WVMHEFRLEG KSRGQTMNNP KDEWVVCKVF NKKGEAKAAR  180
AADVDAESPA VTTPNASSVV DAGEGAGDFT DSMFTIDPLC YIPNSDEYTS NQPPAKTTTS  240
TTTNSAAPPY NADYYYPSVP TTAGSFNLMS NYSLTNATSN AQTSTAMASS VPATSGSSWQ  300
HMLMNTAPHG GMMGRRSYDV NLHEQQAIMM RALGGVVGAQ NFGEPAKGLQ LPSSAVTAGS  360
VPPQPGKLGS YDDGEFPYGN YDLASAAMSG RPAAANNLGP RFY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A9e-491917715170NO APICAL MERISTEM PROTEIN
1ut4_B9e-491917715170NO APICAL MERISTEM PROTEIN
1ut7_A9e-491917715170NO APICAL MERISTEM PROTEIN
1ut7_B9e-491917715170NO APICAL MERISTEM PROTEIN
4dul_A9e-491917715170NAC domain-containing protein 19
4dul_B9e-491917715170NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in stress response (By similarity). Binds to DNA-specific sequences of CLPD1 and OAT promoters in vitro (PubMed:18813954). {ECO:0000250|UniProtKB:Q7F2L3, ECO:0000269|PubMed:18813954}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salt and cold stresses. {ECO:0000269|PubMed:18813954}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHM0275730.0HM027573.1 Triticum aestivum NAC transcription factor 8 (NAC8) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020166976.10.0NAC domain-containing protein 77-like
RefseqXP_020166977.10.0NAC domain-containing protein 77-like
SwissprotQ5CD173e-91NAC77_ORYSJ; NAC domain-containing protein 77
TrEMBLM8AE760.0M8AE76_TRIUA; NAC domain-containing protein 77
STRINGTRIUR3_14541-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP51203063
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53950.13e-73NAC family protein