PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_14140-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 628aa    MW: 68408.9 Da    PI: 4.1006
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_14140-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM33.89.8e-11127102128
              NAM 102 lkktLvfykgrapkgektdWvmheyrl 128
                      +kktLvf+ grapkg +t+Wvmheyrl
  TRIUR3_14140-P1   1 MKKTLVFHAGRAPKGDRTNWVMHEYRL 27 
                      8************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100516.392152IPR003441NAC domain
SuperFamilySSF1019413.92E-11134IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0016021Cellular Componentintegral component of membrane
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 628 aa     Download sequence    Send to blast
MKKTLVFHAG RAPKGDRTNW VMHEYRLLDN DGPQVPPSPP QSPLVAAAKF VVMQPCLRMN  60
LVDLLARVGR GCSILHGVEP HHGRGIQQIS LQIKVVFPEI SILGEDPSLN HHLFGYKGVV  120
YQLICGYNSS DVMMFIPLLG AQDMHVVCRI FQKVGSGPQN GAQYGAPYME EEWENEDDAI  180
ENTPTSGTST EMLAITDTAS AESNVEDEHI FSGINERVQT PEVLIPQEIA PLQAIAPPQA  240
QDFNGTGMVS YADGDVPLDE ILQEPVSDVS ADNTGEPEEQ SPLDDHFSLA DLSGCPNQDD  300
GYVRQAGPIM FSDPSNGDQA YYPMRTYGNR NHAYRALSAE EFSDTGNGTN AYSGQQQACP  360
SDEQNLYSGL QQACPSDEQN LYLPTNGLPF PQQMDDNAPF YEASSDHKWE NGKDDYVNVD  420
DISLFEDDDI MALLNASDND FSLDLLGPVD GSNSQLPAAS NFDQKDEAKA QYGASSSGSR  480
ENLYPDTMVP DVPMDDNAGK RYFTNMLGSY PAPPAMASEF PPTTGKSIAA LSGPSQIRVT  540
AGIVQLGDHS FTGNEGSWPL QKNGVFNLLL SFTVENNVST KSITFDDEPA ATRVSTVPMV  600
LRGGLYLFFV SAMILMLSFK VGSCIYSR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3664700.0AK366470.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2043F06.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020195893.10.0NAC domain-containing protein 78-like
TrEMBLM7ZIG60.0M7ZIG6_TRIUA; NAC domain-containing protein 78
STRINGTRIUR3_14140-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP129312833
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10500.17e-12NAC domain containing protein 53