PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIUR3_14074-P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 218aa MW: 23332.1 Da PI: 5.6435 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 29.7 | 1.6e-09 | 37 | 79 | 2 | 48 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaia 48 +++GV+ ++ grWvA r + r ++g+f ++ eA++a++ TRIUR3_14074-P1 37 KFRGVY-ERQPGRWVADFRSH---RLNVRRWIGTFPSEAEAKAAYDD 79 89***8.777*******5553...245999*******99******96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51257 | 6 | 1 | 21 | No hit | No description |
Gene3D | G3DSA:3.30.730.10 | 6.4E-12 | 36 | 84 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 13.445 | 37 | 95 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 2.8E-6 | 37 | 78 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.7E-9 | 37 | 83 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 1.6E-4 | 37 | 99 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence Send to blast |
MVVKEERGCG GLHLQAAGGG CRGSMRGAKV AKLPSRKFRG VYERQPGRWV ADFRSHRLNV 60 RRWIGTFPSE AEAKAAYDDS VTRFSLSGYV QVDIGSAASP ADLGRNVHGH KTDPVSDESN 120 QSEMRLKQDD VGATVPSSAP CVSSLTSPPS PPLPAGVMPH EALPYVDERQ MVEPFLAEDL 180 GSNDLITAAD LANLPLPSLD DKLDFSSGDW SLASSGLQ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020146760.1 | 1e-106 | ethylene-responsive transcription factor CRF2-like | ||||
TrEMBL | T1M933 | 1e-158 | T1M933_TRIUA; Uncharacterized protein | ||||
STRING | TRIUR3_14074-P1 | 1e-159 | (Triticum urartu) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP14003 | 20 | 23 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65130.1 | 1e-10 | ERF family protein |