PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIUR3_14039-P1

Organism

Triticum urartu

Taxonomic ID

4572

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 720aa MW: 77127.4 Da PI: 6.607

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIUR3_14039-P1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	49.4	8.7e-16	456	495	2	41
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 ++k+C+CkkskClk+YCeCf+ag++Cse C+C++C Nk + TRIUR3_14039-P1 456 SCKRCSCKKSKCLKLYCECFHAGVFCSEPCSCQGCLNKPS 495 689**********************************976 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM01114	3.1E-15	455	496	IPR033467	Tesmin/TSO1-like CXC domain
PROSITE profile	PS51634	15.766	456	561	IPR005172	CRC domain
Pfam	PF03638	7.6E-12	458	493	IPR005172	CRC domain

Sequence ? help Back to Top
Protein Sequence Length: 720 aa Download sequence Send to blast
MDTPDRPRAG AAAGFEDSPV FNFINNLSPI PPPKPQDTSH NVHLFKSSDL APVSSIFASP 60 HVNPPKESKL LIRDDSVQLS QDSNSPNSVR TRLGSAIRLI KCKNIVSENC SFTCHLNQGP 120 IDSSANRSNS TSKLPQTIQF VGDSSECGKN QNADGKKDLA RDQEGIELEG ALLDHTGPDK 180 IDSSQPGRIV HENQQCEQQK DGFTAYDGDY LITHESSMDM LRLAPPCETD TQLVNETLNA 240 DNVFSGNSLL TDGPSGSYIS NAAHDPNLYW DGTVEGPTTD YTPQLLPGAC QSQSVSNDQI 300 CNAVEEPSDH IPIDQSALSQ NMRGMRRRCL FNEKAGAVNK AAKKTSDRHS ANTTTPRCKT 360 NSGDKPVRTP PCALPGIGLH LNALAPISTD KIVPQAAQSS INQASNFPCA VSSSTSEPNI 420 VNEDSSQAIV VANADESGQG SPKKKRHKFD DGDGTSCKRC SCKKSKCLKL YCECFHAGVF 480 CSEPCSCQGC LNKPSNMEIV LSTREQIESR NPLAFAPKVI RTSEPGQESG LLMFLLSIEG 540 LGPLSIEEAK QGNEENSACV KEEKKEDDNN QLVICPAANP APAENVLTTP SAMDIRPLAS 600 LPPSSSKRPR STTKVLGHPS RLCNSQAPLK TDTVLSPFEN YAEIMFGVGT SDSLKGGLSP 660 RTSVKVVSPN KKRVSPPRIG TGLSPICKSG RKLILKSIPS FPSLGGDVNN ADTKTTLPAP

Sequence ? help Back to Top

Protein Sequence Length: 720 aa Download sequence Send to blast

MDTPDRPRAG AAAGFEDSPV FNFINNLSPI PPPKPQDTSH NVHLFKSSDL APVSSIFASP  60
HVNPPKESKL LIRDDSVQLS QDSNSPNSVR TRLGSAIRLI KCKNIVSENC SFTCHLNQGP  120
IDSSANRSNS TSKLPQTIQF VGDSSECGKN QNADGKKDLA RDQEGIELEG ALLDHTGPDK  180
IDSSQPGRIV HENQQCEQQK DGFTAYDGDY LITHESSMDM LRLAPPCETD TQLVNETLNA  240
DNVFSGNSLL TDGPSGSYIS NAAHDPNLYW DGTVEGPTTD YTPQLLPGAC QSQSVSNDQI  300
CNAVEEPSDH IPIDQSALSQ NMRGMRRRCL FNEKAGAVNK AAKKTSDRHS ANTTTPRCKT  360
NSGDKPVRTP PCALPGIGLH LNALAPISTD KIVPQAAQSS INQASNFPCA VSSSTSEPNI  420
VNEDSSQAIV VANADESGQG SPKKKRHKFD DGDGTSCKRC SCKKSKCLKL YCECFHAGVF  480
CSEPCSCQGC LNKPSNMEIV LSTREQIESR NPLAFAPKVI RTSEPGQESG LLMFLLSIEG  540
LGPLSIEEAK QGNEENSACV KEEKKEDDNN QLVICPAANP APAENVLTTP SAMDIRPLAS  600
LPPSSSKRPR STTKVLGHPS RLCNSQAPLK TDTVLSPFEN YAEIMFGVGT SDSLKGGLSP  660
RTSVKVVSPN KKRVSPPRIG TGLSPICKSG RKLILKSIPS FPSLGGDVNN ADTKTTLPAP

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK354434	0.0	AK354434.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1007E24.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020189110.1	0.0	protein tesmin/TSO1-like CXC 2
TrEMBL	M7ZJ28	0.0	M7ZJ28_TRIUA; Uncharacterized protein
STRING	TRIUR3_14039-P1	0.0	(Triticum urartu)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP12746	26	30

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	3e-32	TESMIN/TSO1-like CXC 2