PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_13752-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 639aa    MW: 68357.6 Da    PI: 8.4846
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_13752-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY60.33.6e-19235279144
                      ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSS CS
             WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaed 44 
                      ++Dg++WrKYGqK  kg+++pr+YYrCt a gCpv+k+ +r +++
  TRIUR3_13752-P1 235 MNDGCQWRKYGQKISKGNPCPRAYYRCTVAtGCPVRKQADRVETN 279
                      58***************************99*******9998765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.808.4E-19220278IPR003657WRKY domain
SuperFamilySSF1182901.7E-17228280IPR003657WRKY domain
PROSITE profilePS5081120.22230279IPR003657WRKY domain
SMARTSM007741.5E-15235296IPR003657WRKY domain
PfamPF031062.6E-16236277IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 639 aa     Download sequence    Send to blast
MIKGDQRQLG GHEEQLKDQM RDDHQASDGN FFKFLQNQSS IKKEAQEDKI ASTRAEMGEV  60
SKENERLKMM LSRMVEDHRS LQKQFDVLHQ QGQGKNLAVG SPEHTSPVDG PGFVSLRLGT  120
SAGMSRQNME EQIKGSTNNP DDKGIFLGLS SACGAVGART DGSETKVQPD VVTLSPGGSS  180
EEDAATETTT ISAASKAAKI PRSTGGVEAD EEVAQQPLAK KARVSVRARC DTPTMNDGCQ  240
WRKYGQKISK GNPCPRAYYR CTVATGCPVR KQADRVETNW SRSHMPVADG GLECWGLEKT  300
VLGFGLGSVA TCAEMRGGHV DPDHHLRGCA QPPTLRLRNR HGLHHLRCRV HAHVRLLHLV  360
WLSLCQPPAA PSLHGLRFGL PATAMDASSN QLGGRPFFLP TATGTSISAT PSYPTITLDL  420
TSQAASQHAF SLSNCNKFSS SFTGSHGHNS STSRYPSTSF SFSSFDASSL PGSTTWPSGV  480
GSYLGYGSSS GASYNGPNKG TFEAALSSIH GRQQGSVASL YQPVHVQQRV AELRSGGTGM  540
AAPTVLTDTI AKAITSNPGF HTALTAAITS YVGKSAAGGG KGLGRTERFS KWQDEVGAVT  600
GAVKLHKCYC FDVSGVKIME QINSLDEAYD LCLWINLII
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2485550.0AK248555.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf78b10, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020199168.10.0probable WRKY transcription factor 61
TrEMBLM8A7D80.0M8A7D8_TRIUA; Putative WRKY transcription factor 72
STRINGTRIUR3_13752-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50473862
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.11e-38WRKY DNA-binding protein 72