PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_13553-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GeBP
Protein Properties Length: 227aa    MW: 25047 Da    PI: 8.9763
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_13553-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57340.29.4e-1328725397
           DUF573 53 qlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97
                      l++K+rrLK+K++   ++ak+g+e++++++hd++i+e++kk+Wg
  TRIUR3_13553-P1 28 SLSDKVRRLKQKYQLLATRAKNGREQELHTPHDRSIYEHAKKVWG 72
                     699*****************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045042.5E-112772IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    Send to blast
MTTSFSSCAA SPHTAPRAAC SLVPPMTSLS DKVRRLKQKY QLLATRAKNG REQELHTPHD  60
RSIYEHAKKV WGLVGSGGGD GGGSGYENYG GGDSDELQYS GDSDDDMESQ RDDRYHIKNR  120
KVRPITAANG NGIGLGAVNA NGRGKSGLEK GKDAYPYLWE TVEELSKEHP SGAAFKKAFE  180
VLEGSKARAI EEKLRRFRLT EIRQQLRRMD LMKETVRMVL DALESAD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3705900.0AK370590.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2112N22.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020169455.11e-135STOREKEEPER protein-like
TrEMBLA0A446T4F41e-167A0A446T4F4_TRITD; Uncharacterized protein
TrEMBLM7ZYJ71e-167M7ZYJ7_TRIUA; Uncharacterized protein
STRINGTRIUR3_13553-P11e-168(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP26713587
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.12e-07DNA-binding storekeeper protein-related transcriptional regulator