PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIUR3_11319-P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | BES1 | ||||||||
Protein Properties | Length: 544aa MW: 56825.5 Da PI: 10.7942 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 202.4 | 1.4e-62 | 203 | 350 | 2 | 147 |
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl.eeaeaagssasaspessl 94 g++r ptw+ErEnn+rRERrRRaiaakiy+GLRa+Gny+lpk++DnneVlkALc+eAGwvve+DGttyr+g+kp+ ++ +sasasp+ss+ TRIUR3_11319-P1 203 GGTRVPTWRERENNRRRERRRRAIAAKIYTGLRAYGNYNLPKHCDNNEVLKALCNEAGWVVEPDGTTYRRGCKPPpQARPDPMRSASASPCSSY 296 789************************************************************************888888999********** PP DUF822 95 qsslkssalaspvesysaspksssfpspssldsislasa.........asllpvlsvlslvs 147 q +sp++sy++sp+sssfps+ s+++i+l +sl+p+l++ls+ + TRIUR3_11319-P1 297 Q--------PSPRASYNPSPASSSFPSSGSSSHITLGGGnnfiggvegSSLIPWLKNLSSNP 350 *........*************************9987678999999999999999998744 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 2.3E-67 | 203 | 347 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
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Protein Sequence Length: 544 aa Download sequence Send to blast |
MVAAAKRETI NSNSLIQRRR VLPAGAPMMH GPAGGSGGGG GHGLGGTRVP TWRERENNRR 60 RERRRRRARA GRHEGAHVEG AGEQPAEGAA AAAGTGWAAR GCPRGGSGRT TGGGSGGGGG 120 HGLGGTRVPT WRERENNRRR ERRRRRARAG RHEGAHVEGA GEQPAEGAAA AAGTGWAARG 180 CPRGGSGRTT GGGSGGGGGH GLGGTRVPTW RERENNRRRE RRRRAIAAKI YTGLRAYGNY 240 NLPKHCDNNE VLKALCNEAG WVVEPDGTTY RRGCKPPPQA RPDPMRSASA SPCSSYQPSP 300 RASYNPSPAS SSFPSSGSSS HITLGGGNNF IGGVEGSSLI PWLKNLSSNP SFASSSKLPQ 360 LHHLYFNGGS ISAPVTPPSS SPTHTPRMKT DWESQCVLPP WAGANYTSLP NSTPPSPGHH 420 VAPDPAWLAG FQISSAGPSS PTYNLVSHNP FGIALASSSR ACTPGQSGTC SPVMGDHAPA 480 HHDVQMEMAD GAPDDFAFGS NSNGNNGSPG LVKAWEGERI HEECASDELE LTLGSSRTRG 540 EQPF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5zd4_A | 3e-25 | 206 | 278 | 372 | 444 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 3e-25 | 206 | 278 | 372 | 444 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 3e-25 | 206 | 278 | 372 | 444 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 3e-25 | 206 | 278 | 372 | 444 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
Search in ModeBase |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 137 | 147 | RRRERRRRRAR |
2 | 138 | 145 | RRERRRRR |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | May function in brassinosteroid signaling. {ECO:0000250}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00248 | DAP | Transfer from AT1G78700 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK360181 | 0.0 | AK360181.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1112F17. | |||
GenBank | AK366794 | 0.0 | AK366794.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2046O02. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020152195.1 | 0.0 | protein BZR1 homolog 3-like | ||||
Swissprot | Q5Z9E5 | 1e-177 | BZR3_ORYSJ; Protein BZR1 homolog 3 | ||||
TrEMBL | M8APZ1 | 0.0 | M8APZ1_TRIUA; Uncharacterized protein | ||||
STRING | TRIUR3_11319-P1 | 0.0 | (Triticum urartu) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1366 | 38 | 112 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G78700.1 | 2e-66 | BES1/BZR1 homolog 4 |
Publications ? help Back to Top | |||
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