PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIUR3_11154-P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 245aa MW: 26854.5 Da PI: 4.7493 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 32.6 | 2.3e-10 | 11 | 111 | 35 | 128 |
NAM 35 kevdiykvePwdLp.kkvka..eekew.yfFskrdkkyatgk......rknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgek 118 ++vd+y + P+ Lp ++++ + k w +fF++r +a+g r++ g W ++k+ +++g + g + ++f+ ++g+ TRIUR3_11154-P1 11 EDVDVYGTRPEALPfHRCNRgaSGKVWgHFFTTRPAGAASGVasggpgSYVRVVPGGLWVRYDEEKAYADADGDVLGYRCRFAFH---GEDGKL 101 789***********65444422566889******999997665555667789999*****************************9...567789 PP NAM 119 tdWvmheyrl 128 t W m+e+rl TRIUR3_11154-P1 102 TAWRMKEFRL 111 ********98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 12.161 | 1 | 138 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 4.84E-11 | 11 | 136 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence Send to blast |
MTKGTTGVPP EDVDVYGTRP EALPFHRCNR GASGKVWGHF FTTRPAGAAS GVASGGPGSY 60 VRVVPGGLWV RYDEEKAYAD ADGDVLGYRC RFAFHGEDGK LTAWRMKEFR LNEGAAAYRG 120 VAFHPVAKNL VAWKVYNDVE EPLSDDEGDD EDEDEDDEAE EMEVDDPVAA AACTEDDLTQ 180 RQDKKKKQKL RGCVVRKVFT KPAVPPPSAR SSDDGSAGSS SRYRSADEEA GYPGEEQARK 240 RARWV |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020172477.1 | 2e-91 | NAC transcription factor NAM-1-like | ||||
TrEMBL | M7YKI6 | 1e-178 | M7YKI6_TRIUA; Uncharacterized protein | ||||
STRING | TRIUR3_11154-P1 | 1e-178 | (Triticum urartu) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP12891 | 22 | 31 |