PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_10970-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 277aa    MW: 30461.8 Da    PI: 5.1224
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_10970-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM70.44.9e-221090167
              NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...............kvkaeekewyfFskrdkk 67
                     +ppGfrFhPt+eelv +yL++kv++++++l  +i+evd+y++ePwdL++               + +++++ewyfFs +d+k
  TRIUR3_10970-P1 10 VPPGFRFHPTEEELVGYYLARKVAAQNIDL-GIIQEVDLYQTEPWDLQEkcgggrggrgtrqvaADEQSSSEWYFFSFKDRK 90
                     69****************************.99**************955899999999885432222445********997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.44E-315129IPR003441NAC domain
PROSITE profilePS5100518.71410160IPR003441NAC domain
PfamPF023651.1E-1111105IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    Send to blast
MDQHQEESCV PPGFRFHPTE EELVGYYLAR KVAAQNIDLG IIQEVDLYQT EPWDLQEKCG  60
GGRGGRGTRQ VAADEQSSSE WYFFSFKDRK GRAPNGRKTD WIIHEYRLQT SEHGPTQEEG  120
WVVCRAFQKP TPNQRQSYTF PAYATALGLG GYYDARPCLH GQGGNLHYLH SAASTAGAGG  180
LCFPGQSAQY SSEDTLECKK GIFNNIPQLI QSPPPATAYA GCSEAGYDVV QPKLAATGID  240
WNFLDILFST SLLPDSSAAS AASNLQLPLH QSSLIYE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-23512910168Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020184116.11e-128NAC domain-containing protein 30-like
RefseqXP_020184117.11e-128NAC domain-containing protein 30-like
TrEMBLM8AFM50.0M8AFM5_TRIUA; NAC domain-containing protein 7
STRINGTRIUR3_10970-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP25943791
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71930.11e-48vascular related NAC-domain protein 7