PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_08913-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-X1
Protein Properties Length: 949aa    MW: 102804 Da    PI: 7.9293
Description NF-X1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_08913-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-NF-X116.22.4e-05201223218
         zf-NF-X1   2 G......kHkCqklCHeGpCppC 18 
                      G      +H Cq  CH+GpC++C
  TRIUR3_08913-P1 201 GhklacaNHACQDVCHPGPCGEC 223
                      55555559*************** PP

2zf-NF-X118.25.4e-06264281118
         zf-NF-X1   1 CGkHkCqklCHeGpCppC 18 
                      CG H+C+ +CHeG+CppC
  TRIUR3_08913-P1 264 CGLHRCKGTCHEGECPPC 281
                      ****************** PP

3zf-NF-X116.71.6e-05469485117
         zf-NF-X1   1 CGkHkCqklCHeGpCpp 17 
                      CG H C ++CH+ pC+p
  TRIUR3_08913-P1 469 CGLHACARPCHPSPCDP 485
                      ***************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd060086.12E-561125No hitNo description
SMARTSM004380.2987105IPR000967Zinc finger, NF-X1-type
PfamPF01422789104IPR000967Zinc finger, NF-X1-type
CDDcd060081.94E-10132180No hitNo description
SMARTSM004380.0038142161IPR000967Zinc finger, NF-X1-type
PfamPF014220.0028142159IPR000967Zinc finger, NF-X1-type
CDDcd060082.83E-8196239No hitNo description
SMARTSM004380.0036206225IPR000967Zinc finger, NF-X1-type
PfamPF014220.0026206223IPR000967Zinc finger, NF-X1-type
CDDcd060087.07E-13254302No hitNo description
SMARTSM004380.001264283IPR000967Zinc finger, NF-X1-type
PfamPF014227.0E-5264281IPR000967Zinc finger, NF-X1-type
CDDcd060085.09E-7349401No hitNo description
SMARTSM004380.0043359378IPR000967Zinc finger, NF-X1-type
PfamPF014220.044359377IPR000967Zinc finger, NF-X1-type
SMARTSM004380.49416434IPR000967Zinc finger, NF-X1-type
PfamPF01422120416432IPR000967Zinc finger, NF-X1-type
SMARTSM004380.05469504IPR000967Zinc finger, NF-X1-type
PfamPF014220.0029469485IPR000967Zinc finger, NF-X1-type
PfamPF014223.5506532IPR000967Zinc finger, NF-X1-type
SMARTSM004384.1513534IPR000967Zinc finger, NF-X1-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 949 aa     Download sequence    Send to blast
MSYVPDWMHK HVLRENVPAR PTKMLVPLSE GDVPARDIAY TCFCRRRRDP PNDLYLTPHS  60
CGEPCSKPLD RADPAAKGDD DDVATRCPHL CVLQCHPGPC PPCKAFAPER PCPCGKQSIT  120
RRCADRITAV TCGQSCEKLL PCGRHHCDKV CHTGPCGECE VDYPALCFCG KKTETLLCGE  180
MVLKGKLSDK DGVFSCSEVC GHKLACANHA CQDVCHPGPC GECELMPAKV TTCHCGKTRL  240
QEKRTSCLDP IATCDKVCDK RLPCGLHRCK GTCHEGECPP CLVRVEQRCR CGSSGQMVEC  300
YKVSKEEFRC NKPCGRKKNC GRHRCSECCC PLSKPFAQHQ GESMDPHFCQ IPCGKKLRCG  360
QHGCQHLCHS GHCDPCRETI FNDLSCACGR SSIPPPQPCG TPTPSCPHQC IVPQPCGHPA  420
SHQCHFGDCP PCVVPVMREC VGGHVMLRNI PCGSKDIRCN QPCGKNRQCG LHACARPCHP  480
SPCDPPPTNG EASSSSGGKV SCGQLCGVPR RECKHTCNAP CHPSSPCPDV RCEHRATITC  540
SCGRISTTVP CSAGGAYNGD STFDISVIQQ LPMPLQPVES NGKRVPLGQR KLCCDEECVK  600
VERKRVLAEA FDITQPNLDA LHFGENSNAS DLVSDLFRRE PKWVLAIEER CKFLVLGKTR  660
GNSSSNMKFH VFCHMMKDKR DAIRLIADRW KLSVQAVGWE PKRFVTVHVT PKSKVPARVL  720
GSKPGVPVSA AHPYFDPMVD MDPRLVVAML DLPRDADVNS LVLRFGGECE LVWLNDKNAA  780
AVFSDPARAA TALRRLDYGS AYQGAAMFCP SSITQASLSS NVWVGAPRDG GLAAVSSASP  840
WKKDSPSELK PNPHAVMTVL GRAPGTSVLG HSPGSVWKPA VQVTSSNRWN ALESDAATSS  900
GSTDKPKPPL RTDTGSSTSA PGVGAEPSAG QSVSKLQPDI EVEDWEEIV
Functional Description ? help Back to Top
Source Description
UniProtMediates E2-dependent ubiquitination (By similarity). Confers resistance to osmotic stress such as high salinity. Promotes H(2)O(2) production. Negative regulator of some defense-related genes via an salicylic acid (SA)-dependent signaling pathway. Confers susceptibility to the compatible phytopathogen Pseudomonas syringae pv. tomato strain DC3000 (Pst DC3000). Mediates resistance to type A trichothecenes (phytotoxins produced by phytopathogenic fungi). {ECO:0000250, ECO:0000269|PubMed:16905136, ECO:0000269|PubMed:18069941, ECO:0000269|PubMed:19704430}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By brassinosteroids, osmotic stress and high salinity. Accumulates in response to SA, ethylene, methyl jasmonate (MeJA), flagellin (e.g. flg22), and type A trichothecenes such as T-2 toxin and diacetoxyscirpenol (DAS), but not in response to type B trichothecenes such as deoxynivalenol (DON). {ECO:0000269|PubMed:16905136, ECO:0000269|PubMed:18069941, ECO:0000269|PubMed:19704430}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3605820.0AK360582.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1121G13.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020179129.10.0NF-X1-type zinc finger protein NFXL1-like
SwissprotQ9SY590.0NFXL1_ARATH; NF-X1-type zinc finger protein NFXL1
TrEMBLM8AD210.0M8AD21_TRIUA; NF-X1-type zinc finger protein NFXL1
STRINGTRIUR3_08913-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP61303543
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10170.10.0NF-X-like 1