PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIUR3_08050-P1

Organism

Triticum urartu

Taxonomic ID

4572

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 374aa MW: 40304.5 Da PI: 4.3827

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIUR3_08050-P1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.9	0.0014	67	88	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 kC+ Cgk++++k ++ H +++ TRIUR3_08050-P1 67 KCSTCGKTYKNKRAFNGHKMKC 88 7*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence Send to blast
MTAVESASND VDRSCEFLPF LTNLVASQLL EEAQAKPEVL RFLLFLTNSI ACHFPQEASK 60 PSEMGKKCST CGKTYKNKRA FNGHKMKCKS PKNPEQNAAG QEEASSSVGD RKDLLNFHIE 120 RRPRSSRGAV KEMDGGNEVF PSEAEIDAAE GLSLLQYRCG KDTSSDNEPG IDYSGVESAA 180 DNSDAVQEDN PCLPLILGKL NKIISDRNSA SVNLCGGAEK CGNEALSLEE TGLIHNDDVM 240 RIYVDSQRLV DCPENSVVVE PKRPKLDLKV SDSSDNPASD GAQGGNNDAS RSGTPKLKQT 300 SLTEPMATEA DREQEQKSDV LEAPLPLATT SVDQSGTDSP GDESAADTSD EVRDSMVVLQ 360 VAQGLLDLRN CTDR

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence Send to blast

MTAVESASND VDRSCEFLPF LTNLVASQLL EEAQAKPEVL RFLLFLTNSI ACHFPQEASK  60
PSEMGKKCST CGKTYKNKRA FNGHKMKCKS PKNPEQNAAG QEEASSSVGD RKDLLNFHIE  120
RRPRSSRGAV KEMDGGNEVF PSEAEIDAAE GLSLLQYRCG KDTSSDNEPG IDYSGVESAA  180
DNSDAVQEDN PCLPLILGKL NKIISDRNSA SVNLCGGAEK CGNEALSLEE TGLIHNDDVM  240
RIYVDSQRLV DCPENSVVVE PKRPKLDLKV SDSSDNPASD GAQGGNNDAS RSGTPKLKQT  300
SLTEPMATEA DREQEQKSDV LEAPLPLATT SVDQSGTDSP GDESAADTSD EVRDSMVVLQ  360
VAQGLLDLRN CTDR

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020164845.1	0.0	uncharacterized protein LOC109750293
Refseq	XP_020164846.1	0.0	uncharacterized protein LOC109750293
TrEMBL	M7YW47	0.0	M7YW47_TRIUA; Uncharacterized protein
STRING	TRIUR3_08050-P1	0.0	(Triticum urartu)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP15758	11	11