PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_07811-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 318aa    MW: 34533.4 Da    PI: 4.2914
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_07811-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.25.5e-20103154156
              AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      ++++GVr+++ +g+++AeIrdp+   k  r++lg+f+taeeAa  ++ a+++l+g+
  TRIUR3_07811-P1 103 PKFRGVRRRP-WGKYAAEIRDPN---KGVRVWLGTFDTAEEAAMVYDSAALRLRGP 154
                      79********.**********93...25**************************95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008475.4E-13103153IPR001471AP2/ERF domain
CDDcd000181.27E-32103161No hitNo description
SMARTSM003804.8E-40104167IPR001471AP2/ERF domain
SuperFamilySSF541713.01E-22104162IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.107.3E-31104161IPR001471AP2/ERF domain
PROSITE profilePS5103223.63104161IPR001471AP2/ERF domain
PRINTSPR003674.7E-10105116IPR001471AP2/ERF domain
PRINTSPR003674.7E-10127143IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042991Biological Processtranscription factor import into nucleus
GO:0048366Biological Processleaf development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    Send to blast
MVQAIVAGGK TLDQHRRRVV KEEEEGEEAA AVAMPRVLRV SFEDRDATDS SSDDSPRQGR  60
RFVEEICIEQ PARMTSSPQP QASPFRRGAV LGAKRRADAA EEPKFRGVRR RPWGKYAAEI  120
RDPNKGVRVW LGTFDTAEEA AMVYDSAALR LRGPSATTNF PTPPSPSADP DLAVLADADG  180
DVGHLLGAAT YEESSDESQF VGSPVSVLRP LEVAASTVNA SKPDESTVSG DLKISVDTCR  240
RGGNYSPFCN VDVLVPPEDE DCMFPGLSFA APSIFDDDMI SSRLECYADN VESVSLLDMG  300
ELPVWREVDV IFDDAFSA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-2396161672Ethylene-responsive transcription factor ERF096
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00456DAPTransfer from AT4G27950Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020197015.10.0ethylene-responsive transcription factor CRF1-like
TrEMBLM7YJZ50.0M7YJZ5_TRIUA; Ethylene-responsive transcription factor CRF4
STRINGTRIUR3_07811-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP16903697
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.12e-32cytokinin response factor 4