PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIUR3_07780-P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 221aa MW: 23549.2 Da PI: 4.7277 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 29.7 | 1.6e-09 | 70 | 98 | 27 | 55 |
AP2 27 krkrfslgkfgtaeeAakaaiaarkkleg 55 + +r++lg+f+ta++Aa+a++ a+++l+g TRIUR3_07780-P1 70 VGARVWLGTFDTADDAARAYDVAARRLRG 98 458************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 13.235 | 13 | 106 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 3.0E-9 | 63 | 112 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 8.68E-17 | 66 | 107 | No hit | No description |
Gene3D | G3DSA:3.30.730.10 | 6.9E-17 | 70 | 107 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.55E-11 | 71 | 107 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 3.3E-5 | 71 | 98 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence Send to blast |
MEINVAAGGV TPKNGGMSKR HHSSTPDVID FEAAFEDFED DVDLQAEDDG DDHAVFASKP 60 AFSTGRATLV GARVWLGTFD TADDAARAYD VAARRLRGIK AKVNFPDAAR AGARSRRASR 120 RTAQKPQCPP VRTTAYSATA AAHAHVVQAE QDAMMIKPEL MEFFDADAFV DLTAAVAALP 180 PVTGAKKPTV DEDSSDRSGG CAMLGFADEL GFDPFTLFQL P |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020175335.1 | 9e-73 | ethylene-responsive transcription factor 1-like | ||||
TrEMBL | M7YLX0 | 1e-157 | M7YLX0_TRIUA; Ethylene-responsive transcription factor 1 | ||||
STRING | TRIUR3_07780-P1 | 1e-158 | (Triticum urartu) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP7987 | 30 | 40 |