PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIUR3_03778-P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 220aa MW: 23815 Da PI: 8.9263 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 34.3 | 5.9e-11 | 109 | 155 | 1 | 52 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkk 52 s+++GVr+++ +g W+A ++dp + r +lg+f+t +a++ a+++ TRIUR3_03778-P1 109 SKFRGVRRRP-WGIWAADLHDP-----HhaVRKWLGTFDT-AAEVRAYDVAALE 155 79********.**********7.....559**********.9999*****9987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 9.59E-17 | 109 | 156 | No hit | No description |
SuperFamily | SSF54171 | 9.81E-11 | 109 | 157 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 2.2E-5 | 109 | 155 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 2.0E-16 | 110 | 156 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 15.145 | 110 | 168 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 2.9E-11 | 110 | 163 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.2E-6 | 111 | 122 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.2E-6 | 133 | 149 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence Send to blast |
MAPRLERGGR GFQLPNSELE DSLFLRALIS VVNGDAVVPT LHLEPSSTPH FAAAVPACAS 60 CGVDGCIGCM EGIHLISKSQ SFWGLKTSCA KQGLKDGGVG KIKRRRRGSK FRGVRRRPWG 120 IWAADLHDPH HAVRKWLGTF DTAAEVRAYD VAALEFPTTD TSSCASASAS GSSTVQPHQQ 180 HLAESLHENC KSNASSSAYV PQLPKPGRSM AREQEIWDRL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 102 | 117 | KRRRRGSKFRGVRRRP |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020193074.1 | 3e-75 | ethylene-responsive transcription factor ERF109-like | ||||
TrEMBL | T1LGI8 | 1e-161 | T1LGI8_TRIUA; Uncharacterized protein | ||||
STRING | TRIUR3_03778-P1 | 1e-162 | (Triticum urartu) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1242 | 36 | 124 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33710.1 | 3e-11 | ERF family protein |