PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_03769-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 469aa    MW: 50438.7 Da    PI: 8.9337
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_03769-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY985.9e-31310368259
                      --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers++dp++++itY+++Hnh+
  TRIUR3_03769-P1 310 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRTDPNMLVITYTSDHNHP 368
                      699************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.1E-31302370IPR003657WRKY domain
PROSITE profilePS5081133.109304370IPR003657WRKY domain
SuperFamilySSF1182902.48E-26306370IPR003657WRKY domain
SMARTSM007749.4E-38309369IPR003657WRKY domain
PfamPF031069.8E-26311368IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 469 aa     Download sequence    Send to blast
MAPNSATALR SSVQTQRLWK TVMRSTYQPG MTQRSICRAA SQTMLPREKR HRSTIIVRSG  60
RPDPRVPPEA VPTTSNRQGP TRCPLPLSPQ GGAFRKATAL RLRADRSIIS CTSESTPASA  120
AAAVGSIMCD LFWLSPGEQG DLSDVVRASL HPPHQLPTPA ADEEEEDEYS SLLLEGGGGG  180
GGLVVGHGDE QLGMVAMMMG GNNSSRPPSS DHHVISLHSP PATTYTRPHP EPLAGMLRRP  240
GFEREGDMVV GPPPEIGDRL QHMSIAHHPR VPTAMKPRKS QSKKVVCIPA PTAAPGASGR  300
HSTSGEVVPS DLWAWRKYGQ KPIKGSPYPR GYYRCSSSKG CPARKQVERS RTDPNMLVIT  360
YTSDHNHPWP TQRNALAGST RPSSSSATAA KIAASSSSSL AAAAARNSSN TNVDVDCVGA  420
HHQLKQESDL DLFADMDALS VFSSIDKIQE DDSKQQLFDP FSSGFCDYI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B5e-24279371280Disease resistance protein RRS1
5w3x_D5e-24279371280Disease resistance protein RRS1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC0187272e-76AC018727.10 Oryza sativa chromosome 10 BAC OSJNBa0056G17 genomic sequence, complete sequence.
GenBankAP0149662e-76AP014966.1 Oryza sativa Japonica Group DNA, chromosome 10, cultivar: Nipponbare, complete sequence.
GenBankCP0126182e-76CP012618.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 10 sequence.
GenBankKC9546102e-76KC954610.1 Oryza sativa Japonica Group cultivar Dongjin WRKY2 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020159325.10.0uncharacterized protein LOC109744570, partial
TrEMBLM8A3Y60.0M8A3Y6_TRIUA; Putative WRKY transcription factor 35
STRINGTRIUR3_03769-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP118473039
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.15e-53WRKY DNA-binding protein 35