PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIUR3_03598-P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 215aa MW: 23039.5 Da PI: 7.9499 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 48.2 | 3.4e-15 | 13 | 65 | 1 | 50 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.leleev.ikevdiykvePwdLp.kk 50 lppGfrFhP+d+el+++yL++kv+gk ++ + + +vd++kvePwdLp + TRIUR3_03598-P1 13 LPPGFRFHPRDDELICDYLAPKVTGKVgFSGRRPpMVDVDLNKVEPWDLPgWR 65 79************************986665656**************9433 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 2.48E-16 | 2 | 65 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 11.08 | 13 | 159 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.7E-7 | 14 | 59 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence Send to blast |
MSMSFLSMVE TELPPGFRFH PRDDELICDY LAPKVTGKVG FSGRRPPMVD VDLNKVEPWD 60 LPGWRVRMSK LPRVICKKKS GVGATPRPRN LSNIVHGTPT DTSSPPLPPL MDTTLAQLQA 120 TMNTSAAAAA AALEQVPCFS SFSNNSASNS SYLPMVTGNS NGMGYMDHGL PDFGSYLDPA 180 MNCDKKVLKA VLSQLSSMGG EVVPSMSPQM AAATT |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | HQ650114 | 0.0 | HQ650114.1 Triticum aestivum NAC transcription factor 6B (NAC6B) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020198650.1 | 2e-77 | NAC domain-containing protein 21/22-like isoform X1 | ||||
Refseq | XP_020198651.1 | 2e-77 | NAC domain-containing protein 21/22-like isoform X2 | ||||
TrEMBL | M7ZNX6 | 1e-157 | M7ZNX6_TRIUA; NAC domain-containing protein 21/22 | ||||
STRING | TRIUR3_03598-P1 | 1e-158 | (Triticum urartu) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP10022 | 31 | 44 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G56010.2 | 3e-18 | NAC domain containing protein 1 |