PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIUR3_01346-P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 650aa MW: 70561.1 Da PI: 4.1099 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 60.9 | 4e-19 | 5 | 55 | 77 | 128 |
NAM 77 atksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++gyWkatgkd+++++ g++vg kktLv+++grap+ge+tdWvmhey++ TRIUR3_01346-P1 5 TAADGYWKATGKDRSICN-AGRAVGNKKTLVYHHGRAPRGERTDWVMHEYTI 55 5679**************.999****************************85 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 26.492 | 1 | 78 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 3.53E-21 | 5 | 78 | IPR003441 | NAC domain |
Pfam | PF02365 | 6.9E-8 | 6 | 55 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0016021 | Cellular Component | integral component of membrane | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 650 aa Download sequence Send to blast |
RSSPTAADGY WKATGKDRSI CNAGRAVGNK KTLVYHHGRA PRGERTDWVM HEYTILADAL 60 PPPARGRESY ALYKLFEKSG VGPKNGEQYG APFREEDWLD DDDDCELPAD PIPIAVSLPT 120 RTVTVVEQIG DVLTVDDQIG DVLTVVDQIG GVAVDKQIGV MTVDDQIGDL EVFLLQNGDD 180 QGNSEPQSDF STPVSSQAPL QHGHPQGRPS DDGNTSEVAD ATTSSRGMVM AENTCTELPF 240 GDLEGLLMEI SDDQRATESF QEFSEFVPQL QLQHDDHEHE AWPNANMEEI SVADYTTSNG 300 VVDASGCTVT ELPYEDIEGL LLQLENDQGN VQPLADFSTP VPRHEFHQVG SGDFHGCHGA 360 TFSSVDPSSA VQENRDLDPR SDPSNQITQS ALTNMPLNWE TDCTEETSAM RSVSGLASYD 420 GQDADEEFLE INDFLDPEDV GQQSMNCTAT EHLISSSNGM FDSLEFADAS MFLPGSFDTA 480 GVATENQFGY LGDSGSQNQG LQYTSESWTH NQVALNVRNH MNHNHVVFSH ASGTANFHTV 540 NEQPHNLSPA DSQSWFNSAV SALLDAVPAN PALAAENNVL NRTLQRISSF RSEQAPKEEA 600 SAPVIQVRRR GAGLISVSLL VLLAAILWTF AAGTGYAIKF CKGLWKSSST |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 4e-14 | 1 | 55 | 86 | 140 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK355552 | 0.0 | AK355552.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1022I04. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020192727.1 | 0.0 | uncharacterized protein LOC109778571 | ||||
TrEMBL | T1LA39 | 0.0 | T1LA39_TRIUA; Uncharacterized protein | ||||
STRING | TRIUR3_01346-P1 | 0.0 | (Triticum urartu) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP9128 | 28 | 40 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34190.1 | 5e-37 | NAC domain containing protein 17 |