PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_00968-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 338aa    MW: 36323.9 Da    PI: 9.7352
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_00968-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.63e-052232601254
                      HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
              HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      R +++ +++  L++l+ +      +K + a++L +++eYIk L
  TRIUR3_00968-P1 223 RKEKLGDRITALQQLVSPF-----GKTDTASVLHETIEYIKFL 260
                      677888999*******998.....8****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.227211260IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-7221269IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.89E-5221263No hitNo description
SuperFamilySSF474597.07E-11221279IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0042631Biological Processcellular response to water deprivation
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071215Biological Processcellular response to abscisic acid stimulus
GO:0071472Biological Processcellular response to salt stress
GO:2000214Biological Processregulation of proline metabolic process
GO:2000377Biological Processregulation of reactive oxygen species metabolic process
GO:0005634Cellular Componentnucleus
GO:0001046Molecular Functioncore promoter sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    Send to blast
MPEDRQRPNI PTVRSNGGAG NMHGFLQVGH HDMSSRTDQQ SHMNASSMLN DPSANNLDLA  60
LQGHQQAGDH HRQQQLLSSL GAPELLLSPN SPYGFQSSSL LRSLLEPMAK PAPAAGIQQY  120
QYQQMGGQAG VREPLQFTND AAFWNPSAGF GMAMPAPAVS EQTSVRAVKR PSPAPRGANL  180
ALKSVLEGVG DSSSIVTKKA NSEPAVKKPR TETPSSLPTF KVRKEKLGDR ITALQQLVSP  240
FGKTDTASVL HETIEYIKFL HDQAGVLSAP YLKRGHHQHQ VPQYLKSSSA SPDKSCKDGS  300
GEVSLKGRGL CLVPISSTFA VASDGPVDFW TPFGGQFR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3695050.0AK369505.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2092J07.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020190605.10.0transcription factor bHLH112-like isoform X1
TrEMBLT1L9320.0T1L932_TRIUA; Uncharacterized protein
STRINGTRIUR3_00968-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP22163787
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.31e-46bHLH family protein