PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIUR3_00706-P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 253aa MW: 28535 Da PI: 9.6954 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 42.5 | 2e-13 | 2 | 90 | 43 | 126 |
NAM 43 ePwdLp.k.....kvkaeek......ewyfFskrdk..kyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWv 122 +Pw+Lp + k + + y+ +++ y+t++r+ r+t+ g+W+ +d+ + +++++ vg+k+t+ f+ +++g kt+W+ TRIUR3_00706-P1 2 DPWELPgMiarnnK-----RgggmmrDKYYLTNHTAlvYYNTSSRQVRTTN-GFWQPHAHDTVIRAEHDRIVGIKRTIKFH---QHTGAKTNWI 86 8*****43444321.....12222335577777665224567888888655.*****************************...78899***** PP NAM 123 mhey 126 m+ y TRIUR3_00706-P1 87 MNIY 90 *987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 14.573 | 1 | 124 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 2.75E-11 | 2 | 96 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.3E-5 | 25 | 90 | IPR003441 | NAC domain |
PROSITE profile | PS50808 | 11.745 | 178 | 235 | IPR003656 | Zinc finger, BED-type |
SMART | SM00614 | 1.5E-11 | 178 | 233 | IPR003656 | Zinc finger, BED-type |
Pfam | PF02892 | 3.4E-6 | 181 | 226 | IPR003656 | Zinc finger, BED-type |
SuperFamily | SSF57667 | 4.64E-7 | 181 | 231 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence Send to blast |
MDPWELPGMI ARNNKRGGGM MRDKYYLTNH TALVYYNTSS RQVRTTNGFW QPHAHDTVIR 60 AEHDRIVGIK RTIKFHQHTG AKTNWIMNIY YSLIEGDSFC PGHHHDHEFG APSEDTSFSS 120 PHPRSRPMHY YPKHHSDPRL KSYMEHLGNL LFSDADPDNS AGRGDPPTAD HGQSKKRKKI 180 SNVWDYFTKI FARDINGKVV TYAVCNHCCK ILSGSSKNGT SQLARHACPC KFKPVAAGRN 240 AKDSGGDINV PSS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 174 | 178 | KKRKK |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020149352.1 | 7e-84 | uncharacterized protein LOC109734557 isoform X1 | ||||
Refseq | XP_020149353.1 | 2e-84 | uncharacterized protein LOC109734557 isoform X2 | ||||
TrEMBL | M7YNN5 | 0.0 | M7YNN5_TRIUA; Uncharacterized protein | ||||
STRING | TRIUR3_00706-P1 | 0.0 | (Triticum urartu) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP18590 | 8 | 9 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G02450.1 | 2e-09 | NAC domain containing protein 35 |