PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIUR3_00310-P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 231aa MW: 24500.4 Da PI: 4.847 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 31.8 | 3.6e-10 | 72 | 117 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++++GV++++ +g+++A+Ir+ + +lg e+Aa+a++aa+ kl+g TRIUR3_00310-P1 72 TKFRGVHRKP-SGKYAAQIRHaG-----ESSRWLG----LEDAARAYDAAAVKLHG 117 69*****888.7*********44.....5999988....6**************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 10.231 | 1 | 54 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 5.95E-8 | 15 | 54 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 3.7E-5 | 15 | 60 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 6.7E-12 | 18 | 55 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 13.103 | 73 | 125 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 3.6E-11 | 73 | 125 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 5.3E-17 | 73 | 131 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 3.5E-15 | 73 | 125 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.9E-7 | 74 | 85 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.9E-7 | 107 | 127 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence Send to blast |
MADGRGGGDV SITVCHQCGR QLFLGAFDTA EEAAGAYDAE AVRMRGAKAK TNLKQQPTAR 60 KKAAAARTGA GTKFRGVHRK PSGKYAAQIR HAGESSRWLG LEDAARAYDA AAVKLHGVKA 120 ITNFKQPPMA AAVDDGGESP MDHNDVPELR GVTAKTNLNQ PPMVAGSADG GEESRMDLAD 180 NDFPEQPALD LFSGTITADA QLEDVFADLP PLDLQQVDEL LMDMDFANMM A |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | M7ZMC7 | 1e-168 | M7ZMC7_TRIUA; Ethylene-responsive transcription factor 9 | ||||
STRING | TRIUR3_00310-P1 | 1e-169 | (Triticum urartu) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP29168 | 3 | 4 |