PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Tp57577_TGAC_v2_mRNA8858 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
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Family | bZIP | ||||||||
Protein Properties | Length: 197aa MW: 22665.9 Da PI: 6.1314 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 20.2 | 1.3e-06 | 72 | 92 | 17 | 37 |
HHHHHHHHHHHHHHHHHHHHH CS bZIP_1 17 ArrsRqRKkaeieeLeekvke 37 Arr+R+RKk+++ +Le kvke Tp57577_TGAC_v2_mRNA8858 72 ARRYRLRKKMYLTNLESKVKE 92 9******************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence Send to blast |
MDGKMDQGIY ITSSFSNIGP TSDAARDVNI GSNSIAEQAE IWAASRAKSG LNCDLNMDPK 60 KARRIMLKSL EARRYRLRKK MYLTNLESKV KETQVQIAYD LQPKIELELD QKSSLMLEQE 120 MLIHRINILE KEMLLKSALT KDLLDQLNML NELYTKQQEQ QTQMWNDSNV HPISYNPLSH 180 DYSNYHDQGE NMLPLL* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 72 | 78 | RRYRLRK |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Tp57577_TGAC_v2_mRNA8858 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004500440.1 | 1e-43 | uncharacterized protein LOC101503209 | ||||
TrEMBL | A0A072UZ57 | 5e-57 | A0A072UZ57_MEDTR; Uncharacterized protein | ||||
STRING | XP_004500440.1 | 4e-43 | (Cicer arietinum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF18156 | 3 | 4 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42380.2 | 2e-09 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Tp57577_TGAC_v2_mRNA8858 |