PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Tp57577_TGAC_v2_mRNA7969 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
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Family | WRKY | ||||||||
Protein Properties | Length: 172aa MW: 19424.6 Da PI: 6.2687 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 36.1 | 1.3e-11 | 10 | 50 | 22 | 59 |
EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 22 rsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 r+YYrCt++ gC+++k+v++ +edp + ++tY g+H+++ Tp57577_TGAC_v2_mRNA7969 10 RNYYRCTHKyeqGCKATKQVQKIQEDPLLHKTTYYGHHTCR 50 99******99999*************************996 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF118290 | 2.88E-11 | 9 | 50 | IPR003657 | WRKY domain |
SMART | SM00774 | 4.2E-8 | 10 | 51 | IPR003657 | WRKY domain |
Pfam | PF03106 | 5.3E-11 | 10 | 50 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 10.774 | 10 | 47 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 1.7E-11 | 10 | 50 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence Send to blast |
MNVYIYVIFR NYYRCTHKYE QGCKATKQVQ KIQEDPLLHK TTYYGHHTCR LIQNPEIIVD 60 SLSPAHHSSM FLSFDNSFPT PTKQDCPFLS TSSHPSSTSS SVKKEECKEE IVNPPPPPPP 120 PSSSHNDYLS GLTFDDSDRH VTLSSTLDSH DHLGVNISDI LYDDVLNWPL S* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Tp57577_TGAC_v2_mRNA7969 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003623638.1 | 2e-77 | probable WRKY transcription factor 70 | ||||
TrEMBL | A0A2K3NF97 | 1e-114 | A0A2K3NF97_TRIPR; WRKY transcription factor | ||||
STRING | AES79856 | 6e-77 | (Medicago truncatula) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1995 | 34 | 86 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56400.1 | 2e-14 | WRKY DNA-binding protein 70 |
Link Out ? help Back to Top | |
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Phytozome | Tp57577_TGAC_v2_mRNA7969 |