PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Tp57577_TGAC_v2_mRNA657 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
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Family | G2-like | ||||||||
Protein Properties | Length: 153aa MW: 17231.4 Da PI: 6.6743 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 39.4 | 1.3e-12 | 1 | 29 | 27 | 55 |
G2-like 27 AtPktilelmkvkgLtlehvkSHLQkYRl 55 AtPk+i +lm+v gLt ++v+SHLQk Rl Tp57577_TGAC_v2_mRNA657 1 ATPKHIIKLMNVRGLTQSKVASHLQKVRL 29 9*************************997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 1.8E-10 | 1 | 32 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.3E-9 | 1 | 29 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 153 aa Download sequence Send to blast |
ATPKHIIKLM NVRGLTQSKV ASHLQKVRLG LKGKKTKLKK ELSKSGKQNQ YHVPNNESLE 60 VVQSMPMPEH NESVEVVQSM PAAQQDQNVV LNSANIQCDY NIPAQAQQHE NVFDDFDISK 120 LFTNETNMMV DGSSYLYDEA WNSSEYGTFN WC* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Tp57577_TGAC_v2_mRNA657 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2Z6LGU9 | 7e-42 | A0A2Z6LGU9_TRISU; Uncharacterized protein |
Link Out ? help Back to Top | |
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Phytozome | Tp57577_TGAC_v2_mRNA657 |