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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Tp57577_TGAC_v2_mRNA38803 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
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Family |
GRAS |
Protein Properties |
Length: 530aa MW: 59737.5 Da PI: 7.1148 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Tp57577_TGAC_v2_mRNA38803 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 365.2 | 9.2e-112 | 152 | 528 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn.....sseela 79
lv+lL++cAeav+ +d++ a+ lL++l+ +a g+++qR+a++f+++L +rl+ ++ +++ + ++s +n s+e
Tp57577_TGAC_v2_mRNA38803 152 LVQLLIACAEAVACRDKSHASVLLSELKSNALVFGSSFQRVASCFVQGLTERLTLIQPIGNNSVGSDTKSMMNimdaaSEEMEE 235
689***************************************************977777777777777777788888888889 PP
GRAS 80 alklfsevsPilkfshltaNqaIleavegeervHiiDfdis....qGlQWpaLlqaLasRpegpp...slRiTgvgspesgske 156
a+kl +e++P l+f+h++aN+ Ilea+ege+ vH++D+++s +G QW L+q+La+R++++ +lRiT+vg
Tp57577_TGAC_v2_mRNA38803 236 AFKLVYEICPHLQFGHFVANSIILEAFEGESFVHVVDLGMSlglpHGHQWRGLIQSLANRSGSQRvlrRLRITAVGL----CIA 315
99***********************************99874444678*************775433499*******....*** PP
GRAS 157 eleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvv 240
+++ +g+ L+ +A++lgv++ef++ v+k+le+l++e+++v+++E+l+Vn++lqlh +++es + +vL++v +lsPkv+v
Tp57577_TGAC_v2_mRNA38803 316 RIQVIGKELSIYAKNLGVHLEFSI-VEKNLENLKPEDIKVNEKEVLVVNSILQLHCVVKESRGALN---SVLQMVHGLSPKVLV 395
***********************9.8********************************88877777...8************** PP
GRAS 241 vveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGF 324
+veq++ hn++ Fl rf+e+l+yysa+fdsl+a lp+ + +r+k+E++++++ei+n+v+ceg r erhe++ +Wr+r+++aGF
Tp57577_TGAC_v2_mRNA38803 396 MVEQDSGHNGPFFLGRFMESLHYYSAIFDSLDAMLPKYDTKRAKIEQFYFAEEIKNIVSCEGPLRMERHEKVDQWRRRMSRAGF 479
************************************************************************************ PP
GRAS 325 kpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
+ +p++ + qak l k k dgy+v ee+g+lvlgWk++p+v+vS+W+
Tp57577_TGAC_v2_mRNA38803 480 QGAPIKM--VVQAKQWLLKNKiCDGYTVVEEKGCLVLGWKSKPIVAVSCWK 528
****975..56777766666669***************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 530 aa
Download sequence Send
to blast |
MSHNLYYTTS TFKGEVEYNN DENPLMGCYA SLYPNMPILE NSSNSSSWIV PYSDESETIR 60 DHKKLKRSTI TIPILFANIS NHNSTSINTF FKNSNKSSVN SIPRLHFRDH IRTYKQRYFA 120 AEAVEEAAEE HFNYNNSEAE EEDGTCADGM RLVQLLIACA EAVACRDKSH ASVLLSELKS 180 NALVFGSSFQ RVASCFVQGL TERLTLIQPI GNNSVGSDTK SMMNIMDAAS EEMEEAFKLV 240 YEICPHLQFG HFVANSIILE AFEGESFVHV VDLGMSLGLP HGHQWRGLIQ SLANRSGSQR 300 VLRRLRITAV GLCIARIQVI GKELSIYAKN LGVHLEFSIV EKNLENLKPE DIKVNEKEVL 360 VVNSILQLHC VVKESRGALN SVLQMVHGLS PKVLVMVEQD SGHNGPFFLG RFMESLHYYS 420 AIFDSLDAML PKYDTKRAKI EQFYFAEEIK NIVSCEGPLR MERHEKVDQW RRRMSRAGFQ 480 GAPIKMVVQA KQWLLKNKIC DGYTVVEEKG CLVLGWKSKP IVAVSCWKC*
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