PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Tp57577_TGAC_v2_mRNA26394
Organism
Trifolium pratense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
Family bZIP
Protein Properties Length: 339aa    MW: 39720 Da    PI: 7.7318
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Tp57577_TGAC_v2_mRNA26394genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_123.31.4e-072032521463
                                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                     bZIP_1  14 ReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                                R +A+ +R+RK ++i eLe+ +++L+ae  +   ele l ++   l +e+
  Tp57577_TGAC_v2_mRNA26394 203 RHSAQQYRARKVQYIGELERSIQALQAEGYEVSAELEFLDQQNLILGMEN 252
                                89****************************99999999999887777766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0021193254IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.01E-6202253No hitNo description
CDDcd147031.33E-8202245No hitNo description
Gene3DG3DSA:1.20.5.1705.4E-7203248No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    Send to blast
MLLSYPHLIS FSQYSFPLYK MRIIQLAITN HMEISNSSQN MRNYSQEHAS LPPKISKYEI  60
SESCLEGLMS QLGKECGPRR YHRTYSDSML ASEQQHQQQQ QQQQQEVPYW LKDLLDDDDD  120
DNDEPEESEE KLQPSTNNAC SNSSKAHRRS SSDSLAYLNN KTILQYSPER KEQNNMYLLA  180
ADQQPSFLHQ NHPRTDHSKR GKRHSAQQYR ARKVQYIGEL ERSIQALQAE GYEVSAELEF  240
LDQQNLILGM ENRALKQRLD SLSQEHFVKC LEQEVLEREI TRLRNLYQQQ QHKQQQQQQQ  300
QQQKHHGRNR SKQRQDLESS IAKLSLKNKG TESSQKAR*
Cis-element ? help Back to Top
SourceLink
PlantRegMapTp57577_TGAC_v2_mRNA26394
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1254812e-60AC125481.23 Medicago truncatula clone mth2-15n13, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003598009.21e-105basic leucine zipper 61
TrEMBLA0A2K3P8K61e-177A0A2K3P8K6_TRIPR; Transcription factor bZIP63
STRINGAES682601e-103(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2717433
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.24e-34bZIP family protein