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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Tp57577_TGAC_v2_mRNA24680 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
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| Family |
GRAS |
| Protein Properties |
Length: 465aa MW: 52193.1 Da PI: 5.8173 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Tp57577_TGAC_v2_mRNA24680 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 310.5 | 3.9e-95 | 53 | 461 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar..svselykalppsetsekn...sseelaa 80
++lL++cA+a++++d +laq++L+ l+++a +dgd++qRla f++AL +r a+ +++ l++++ +++ + n +++++++
Tp57577_TGAC_v2_mRNA24680 53 EQLLVHCANAIETNDVTLAQQILWVLNNIAPQDGDSNQRLAYSFLRALTNRAAKtgTCKMLVEQVYSNAHN--NltiETHRFSV 134
79***************************************************933333344444333333..34466666666 PP
GRAS 81 lkl..fsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg......ske 156
+l f++++P+++f++ +aN aIlea+eg + +Hi+D++ ++++Q p+L++a+a+R e pp +++T+ ++ ++
Tp57577_TGAC_v2_mRNA24680 135 IELanFVDLTPWHRFGYAAANAAILEATEGFSVIHIVDLSSTHCMQIPTLIDAIANRHEVPPLIKLTVSDHDNNIdqippkLDL 218
66699*****************************************************************98877899976677 PP
GRAS 157 eleetgerLakfAeelgvpfefnvl...vakrledleleeLrvkp....gEalaVnlvlqlhrll................... 214
+++e+g++L +fA++ +v++ef+v+ +++ +++l +e+Lrv++ gEal++n++++lh+++
Tp57577_TGAC_v2_mRNA24680 219 SYQELGSKLVNFARSRNVTLEFRVVsssYTNGFASL-IEHLRVQHmvysGEALVINCHMMLHYIPdetlsnsnsyvydsmsssv 301
89**********************955544444455.888888888888*********************************** PP
GRAS 215 ...desvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
+++++s r+ +L ++++l P++v++v++++d++s+++++r+ +a++y + +d++++ lpr s++r+++E+ + ++i+
Tp57577_TGAC_v2_mRNA24680 302 sttTTTATTTSLRSLFLTALRGLDPTLVILVDEDVDLTSNNLVNRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEAD-ICWKIE 384
*9977788888899***************************************************************.****** PP
GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
n++a+eg +r+er e +kW++r+++a F+ + ++e+ + ++k++l +++ g+ +++e++++vl+Wk++++v++SaW
Tp57577_TGAC_v2_mRNA24680 385 NLIAHEGVQRVERDEPIGKWEQRMRNANFQGIGFGEECVGEVKAMLDEHA-AGWGLKKEDECIVLTWKGHNVVFASAW 461
**************************************************.99************************* PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 465 aa
Download sequence Send
to blast |
MTQFTPSLPY LHQTTTTFSN PSSSMNKNNQ IPTKPWFPTS KALTTFGDTN CMEQLLVHCA 60
NAIETNDVTL AQQILWVLNN IAPQDGDSNQ RLAYSFLRAL TNRAAKTGTC KMLVEQVYSN 120
AHNNLTIETH RFSVIELANF VDLTPWHRFG YAAANAAILE ATEGFSVIHI VDLSSTHCMQ 180
IPTLIDAIAN RHEVPPLIKL TVSDHDNNID QIPPKLDLSY QELGSKLVNF ARSRNVTLEF 240
RVVSSSYTNG FASLIEHLRV QHMVYSGEAL VINCHMMLHY IPDETLSNSN SYVYDSMSSS 300
VSTTTTTATT TSLRSLFLTA LRGLDPTLVI LVDEDVDLTS NNLVNRLRSA FNYLWIPYDT 360
VDTFLPRGSK QRQWYEADIC WKIENLIAHE GVQRVERDEP IGKWEQRMRN ANFQGIGFGE 420
ECVGEVKAML DEHAAGWGLK KEDECIVLTW KGHNVVFASA WLPA*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC137703 | 0.0 | AC137703.43 Medicago truncatula chromosome 8 clone mth2-11d24, complete sequence. |
