PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Tp57577_TGAC_v2_mRNA12227 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
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Family | Nin-like | ||||||||
Protein Properties | Length: 201aa MW: 23630.1 Da PI: 8.8756 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 80.7 | 1.5e-25 | 66 | 114 | 4 | 52 |
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ++ +++s+yF++pi +AA+eL+v+lT LK++CR +GI+RWPhRk+ sl Tp57577_TGAC_v2_mRNA12227 66 MLTRKTISEYFYMPISQAARELNVGLTHLKKRCRDLGIQRWPHRKLMSL 114 6899******************************************997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 17.803 | 50 | 134 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 3.5E-21 | 67 | 114 | IPR003035 | RWP-RK domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0051302 | Biological Process | regulation of cell division |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence Send to blast |
MWYFENCTIA DFDLYDAKNL LPMGNEVDGG FYAENNVFSI SNNIVENNAK EIMKGKRCRE 60 ENSARMLTRK TISEYFYMPI SQAARELNVG LTHLKKRCRD LGIQRWPHRK LMSLQTLIKN 120 VQEQGDESDE KIRNAVEILQ KEMKKVEEKP DLQLEENTKR LRQACFKANY KKRRLMVMRL 180 MDHQHSSISE IESVNDHIRV * |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor. {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Tp57577_TGAC_v2_mRNA12227 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_013459288.2 | 1e-108 | protein RKD2 | ||||
Swissprot | Q9M9U9 | 2e-50 | RKD1_ARATH; Protein RKD1 | ||||
TrEMBL | A0A2K3L4M1 | 1e-137 | A0A2K3L4M1_TRIPR; RWP-RK domain protein | ||||
STRING | XP_004514420.1 | 2e-84 | (Cicer arietinum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF6184 | 30 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G18790.1 | 1e-52 | RWP-RK domain-containing protein |
Link Out ? help Back to Top | |
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Phytozome | Tp57577_TGAC_v2_mRNA12227 |