PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Tp_un0083_003 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
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Family | BES1 | ||||||||
Protein Properties | Length: 296aa MW: 31932.7 Da PI: 9.4624 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 212.6 | 1e-65 | 18 | 163 | 1 | 145 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqs 96 g++gr+ptwkErEnnkrRERrRRaiaaki++GLR+qGnyklpk++DnneVlkALc eAGw+v++DGttyrkgs+p+ + + ++s +ss+q+ Tp_un0083_003 18 GATGRMPTWKERENNKRRERRRRAIAAKIFTGLRSQGNYKLPKHCDNNEVLKALCVEAGWIVHEDGTTYRKGSRPT----TEATPPRVSACSSIQL 109 589*************************************************************************....7788999********* PP DUF822 97 slkssalaspvesysaspksssfpspssldsislasa.....asllpvlsvlsl 145 s++ssa++sp++sy+asp+sss+psp+++d+++++ + a l+p+l++l++ Tp_un0083_003 110 SPQSSAFQSPIPSYQASPASSSYPSPTRFDQNPIRFDpnqssAYLIPYLQNLAS 163 ********************************9975556666888899888876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 4.2E-63 | 20 | 161 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005773 | Cellular Component | vacuole |
Sequence ? help Back to Top |
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Protein Sequence Length: 296 aa Download sequence Send to blast |
MTASGGGGGG GLTAAGAGAT GRMPTWKERE NNKRRERRRR AIAAKIFTGL RSQGNYKLPK 60 HCDNNEVLKA LCVEAGWIVH EDGTTYRKGS RPTTEATPPR VSACSSIQLS PQSSAFQSPI 120 PSYQASPASS SYPSPTRFDQ NPIRFDPNQS SAYLIPYLQN LASTGNLAPL RISNSAPVTP 180 PISSPRSSNP RLPKWQISNF PISAPSSPTR RLHNHYTSIP ECDESDVSTV DSCRWTRFQP 240 VTVSQTCPPS PTFNLVENSV CVGGGDVSVK PWEGEKIHDV GIDDLELTLG NAKGRG |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5zd4_A | 5e-25 | 22 | 106 | 372 | 452 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 5e-25 | 22 | 106 | 372 | 452 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 5e-25 | 22 | 106 | 372 | 452 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 5e-25 | 22 | 106 | 372 | 452 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
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Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC189189 | 1e-165 | AC189189.1 Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB002E24, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006404006.1 | 1e-165 | BES1/BZR1 homolog protein 1 | ||||
Swissprot | Q9S7F3 | 1e-141 | BEH1_ARATH; BES1/BZR1 homolog protein 1 | ||||
TrEMBL | V4LNV8 | 1e-164 | V4LNV8_EUTSA; Uncharacterized protein | ||||
STRING | XP_006404006.1 | 1e-165 | (Eutrema salsugineum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM14467 | 17 | 21 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50750.1 | 1e-117 | BES1/BZR1 homolog 1 |